Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 4e-13 >seq4 Length=1327562 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| || || ||||| || ||||| || ||||| || |||| Sbjct 1258184 ATGCAAATCTTTGTCAAGACCTTGACAGGAAAGACCATCACTCTCGAAGTCGAATCTGGA 1258125 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || ||| || ||| || || ||||| | || ||||| Sbjct 1258124 GATACCATCGACAACGTCAAAGCCAAAATTCAGGACAAGGAAGGAATCCCACCCGATCAA 1258065 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| || || || || | || |||| | ||| || | ||||||||| Sbjct 1258064 CAAAGATTGATTTTCGCAGGAAAGCAATTAGAAGACGGTAGAACCTTGTCAGACTACAAC 1258005 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTT 107767 || |||||||| || || | ||| |||| || Sbjct 1258004 ATCCAAAAGGAATCGACTCTTCACTTGGTCTT 1257973 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 107550 TTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG 107609 ||| | |||||||| || |||||||||||||| || || ||||| || ||||| ||| Sbjct 1259221 TTTCAGATGCAAATCTTCGTCAAAACTTTAACTGGAAAGACCATCACTCTCGAAGTGGAA 1259162 Query 107610 GCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTG 107669 |||| || || ||| | | ||||| ||||||| ||||| ||||| | || Sbjct 1259161 TCTGGTGACACCATCGACAACGTAAAGGCAAAGATTCAAGATAAGGAAGGTATCCCTCCT 1259102 Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 || || || | || || | ||| || || || ||||| || | | ||| | | ||| Sbjct 1259101 GACCAACAACGTCTCATCTTTGCTGGAAAGCAACTGGAAGATGGTAGAACTCTTTCAGAC 1259042 Query 107730 TACAACATTCA 107740 |||||||| || Sbjct 1259041 TACAACATCCA 1259031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876493737407