Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq4 141 9e-29 seq15 100 3e-16 >seq4 Length=1327562 Score = 141 bits (156), Expect = 9e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || |||| ||| | ||| ||||||| || ||||| ||||| ||||||||||||||| Sbjct 1257730 CCACCACGTAGACGAAGAACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAATCGCTC 1257789 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || |||||| | |||||| |||||| |||| |||||||| ||||| || || Sbjct 1257790 AAAGTTCTACCGTCTTCCAATTGTTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGA 1257849 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || || || ||||| ||| ||| || | | || | || || | | ||| ||| Sbjct 1257850 ATTCCCTCCTTGTCTTGAATCTTTGCCTTAACGTTATCAATAGTATCACTAGATTCGACT 1257909 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 || | ||| | ||||| |||||||| || || ||||| ||||||||| || Sbjct 1257910 TCCAAAGTAATAGTCTTTCCGGTCAAAGTCTTGACGAAAATTTGCATACCT 1257960 >seq15 Length=848729 Score = 100 bits (110), Expect = 3e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || ||||| || || || ||||||||||||| || || |||||| | ||||||||| Sbjct 552181 GTGGATTCCTTCTGGATATTGTAATCGCTCAGAGTTCTACCGTCTTCCAACTGTTTACCA 552122 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||||| | ||| || |||||||| || ||||| ||||| || || || Sbjct 552121 GCAAAGATCAATCTTTGTTGGTCGGGAGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTG 552062 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| || ||| || || | || | |||||| |||||||| || Sbjct 552061 ACATTGTCAATGGTGTCACCGGATTCGACCTCTAGGGTGATCGTCTTACCGGTCAAGGTC 552002 Query 137395 TTTACGAATATTTGC 137409 || ||||| |||||| Sbjct 552001 TTGACGAAAATTTGC 551987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543615271600