Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq23 82.4 6e-11 >seq23 Length=563827 Score = 82.4 bits (90), Expect = 6e-11 Identities = 170/244 (70%), Gaps = 7/244 (3%) Strand=Plus/Minus Query 43721 TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAA 43780 |||| | | || |||||||||||||| |||||| | || ||||| ||||| ||||| || Sbjct 140220 TATCTTTAGATCTGGCAAATGTACAAGAAAGCAGAAGCATCATTCTGGACTGCAGAGGAG 140161 Query 43781 GTTGATTTGACTAAAGACTTAGCAC-ATT-GGATTGC-ATTAAAACCACAA-GAAAAACA 43836 ||||| | | |||||| | |||| ||| ||| | | | || |||| ||| || Sbjct 140160 ATTGATCTCTCCAAAGACAT-GCACGATTGGGACAACAAGTTGAATGACAATGAACGTCA 140102 Query 43837 TTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTT 43896 ||||| ||| || ||||| || ||||| || || || || ||||||||||| | Sbjct 140101 CTTTATCTCTCACGTCTTGGCCTTCTTTGCCGCTTCGGATGGAATCGTCAATGAAAACCT 140042 Query 43897 GGTTAGTCGGTTTGCG-CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTC 43955 || | |||| | ||||||||| |||| || || ||||| |||||||| | Sbjct 140041 -TTTGGAACGTTTCAGTGGTGAAGTTCAAGCTGCAGAGGCTCGTTGTTTCTATGGGTTCC 139983 Query 43956 AAAT 43959 | || Sbjct 139982 AGAT 139979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455694828315