Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq28 196 6e-45 >seq28 Length=226377 Score = 196 bits (216), Expect = 6e-45 Identities = 509/769 (66%), Gaps = 13/769 (2%) Strand=Plus/Minus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 ||||| ||||| || |||| || || || | |||||| | || |||| || || Sbjct 217746 GGAAGAGCGATGGAAGCCAAGTTGCAGACGGCTACTTCATCCGGAGCACTGTATTCGATG 217687 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 ||||| || || | |||||| | ||| ||||| || | |||||| || || |||| || Sbjct 217686 ATTTCAGTACAAAGGTTTGAGCACTTGATGGTTCCTAGGTTCTTCTGGTTACTCTTTCTG 217627 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || ||||||||||||||||| || | || || || ||||| | | | || Sbjct 217626 TTTGCAGCGTCCTTGTAAAGCATGTAAGGATTTCCAGTTTCGGTTTGAGCTTCCAAGATG 217567 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 || | ||| | | |||| || || ||||||| || || |||||||| Sbjct 217566 GCATACCAAAGCTTTTGAGCTTTGACGGTTCTCTTGGCTCTACCTTCGGATTCGTACTTG 217507 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 119002 ||||| || ||||| || || || || | | || | ||| ||||| || || | | || Sbjct 217506 GTGTAAAGAGCTTCGAATTCCTCTCCGTAGACGTCAGCGAGACCTGG-GCATTCTCCAGG 217448 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 || | |||||||| | | || ||| || | |||||||||||||||||| ||||| Sbjct 217447 ACAAAGTAGAGACCAATCCTCGTTCTTCTCTACTCTCTTCATGAAGAGGTCTGGAATCCA 217388 Query 119063 GAGCGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 119121 || || |||| || || | | || ||| |||| || | || || || ||| | | Sbjct 217387 AAGAGCGTAGAACAGTTCTCTGGCA-CGAACTTCCTCCTTTCCGTGGTTCTTACGTAGAT 217329 Query 119122 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 119181 |||| || || | || || | ||||| || |||| ||| | || | | | ||| Sbjct 217328 CCAAGAATTCGAAGACGTCTGAATGCCATGGCTCCAAGTAGATGGC-AAAGGCACCT--G 217272 Query 119182 GACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTG 119235 |||| || | || | || || || |||||| ||| | ||||| ||||| | Sbjct 217271 GACGCTTGTTTCCTCCTTGATCGACGTATCTAGCAGTGTTGTTGTAGACACGTAGCATGG 217212 Query 119236 GAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACAT 119295 ||| |||||| | ||| ||||| || || ||| ||| | | | | | | Sbjct 217211 GAACGATACCGTTGGAGAATCCATTGGTTCCAGCAATGTAAGATCCAGTTCCACGAATGT 217152 Query 119296 CGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 119355 ||||| || | ||| || || ||||| ||| ||||| || ||| | ||||| Sbjct 217151 TGTGGACGTTGAGACCGATTCCACCTGCAGTCTTGGAGATCATGGCACACGTCTTGAGAG 217092 Query 119356 TGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 119415 || ||||||| || ||||| ||||| |||| | | || | ||| ||| ||||||| Sbjct 217091 TGTCGTAGATTCCTTCGATGGAGTCGTCCTTCATGGTGACCAAGAAACAGGAAGACATTT 217032 Query 119416 GAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 ||| || || |||||||||||||||||||| | |||||| |||| Sbjct 217031 GAGAATGAGGAGTTCCAGCGTTGAAGAGAGTTGGAGAAGCGTGGGTGAA 216983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434712982280