Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01]
63 sequences; 27,756,302 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq28 208 8e-49
>seq28
Length=226377
Score = 208 bits (230), Expect = 8e-49
Identities = 518/769 (67%), Gaps = 18/769 (2%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGT---GACGACTACACGCGTGTCCGTGAGACGT 53249
||||||| |||||| | || ||||| || |||| | | | | || ||||| |
Sbjct 216903 TCATGCGTGTCGCCATTGGAATCCATGGAACCGACGTCGAAAAGGCCATC---GAGACTT 216959
Query 53250 ACGACTTAATGAGCCAAAAGTACTTT-ACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308
| || | ||| | | ||| ||||| || ||||| | ||||| || |||||||||||
Sbjct 216960 ATAACCTCATGTCCGAGAAG-ACTTTCACCCACGCTTCTCCAACTCTCTTCAACGCTGGA 217018
Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368
|| ||| |||| ||||| ||| ||| |||| | |||||||| ||||| |||||
Sbjct 217019 ACTCCTCATTCTCAAATGTCTTCCTGTTTCTTGGTCACCATGAAGGACGACTCCATCGAA 217078
Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428
|| |||||||| || |||||| ||||||| ||||||||| | ||||| ||||||
Sbjct 217079 GGAATCTACGACACTCTCAAGACGTGTGCCATGATCTCCAAGACTGCAGGTGGAATCGGT 217138
Query 53429 ATCCACTGCTCGAACGTCCGTGCGAACGGCACACCA-ATCAAGGGGACGAACGGCGTCGC 53487
|| || | ||| | |||| |||| | | | || || || || || || |
Sbjct 217139 CTCAACGTCCACAACATTCGTG-GAACTGGATCTTACATTGCTGGAACCAATGGATTCTC 217197
Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547
| | || ||||| || ||||| || |||| ||||||||| || | |||||| | || ||
Sbjct 217198 CAACGGTATCGTTCCCATGCTACGTGTCTACAACAACACTGCTAGATACGTCGATCAAGG 217257
Query 53548 TGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTA 53606
|| ||||| | ||| | | || ||||||||| | ||||| ||||| | ||| |
Sbjct 217258 AGGAAACAAGCGTCCAGGTGCCTTT-GCCATCTACTTGGAGCCATGGCATTCAGACGTCT 217316
Query 53607 TGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC-GTGACCTG 53665
| || || | || || ||| ||| || || | || || | || |||| | || |||
Sbjct 217317 TCGAATTCTTGGATCTACGTAAGAACCACGGAAAGGAGGAAGTTCG-TGCCAGAGAACTG 217375
Query 53666 TT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTG 53724
|| ||| ||||| |||||||| |||||||||||| | | || |||||| ||||||| ||
Sbjct 217376 TTCTAC-GCTCTTTGGATTCCAGACCTCTTCATGAAGAGAGTAGAGAAGAACGAGGATTG 217434
Query 53725 GTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAA 53784
|| || | || || || ||||| || ||| | |||||||| ||||| || |
Sbjct 217435 GTCTCTACTTTGTCCTGGAGAATGCCCAGGTCTCGCTGACGTCTACGGAGAGGAATTCGA 217494
Query 53785 CGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGA 53844
| | || | ||||| | | || | ||||| | ||||| || | |
Sbjct 217495 AGCTCTTTACACCAAGTACGAATCCGAAGGTAGAGCCAAGAGAACCGTCAAAGCTCAAAA 217554
Query 53845 GGTATGGGATGCAATCCTCAAGAGC-CAGGTGGAGACGGGAACGCCGTACATGTGCTACA 53903
| | ||| |||| ||| | | ||| || || || |||| || |||||| ||||
Sbjct 217555 GCTTTGGTATGCCATCTTGGA-AGCTCAAACCGAAACTGGAAATCCTTACATGCTTTACA 217613
Query 53904 AGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952
|||| | | ||| ||||| |||||||||||| | || ||||||
Sbjct 217614 AGGACGCTGCAAACAGAAAGAGTAACCAGAAGAACCTAGGAACCATCAA 217662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215569067400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |