Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq23 187 2e-42 >seq23 Length=563827 Score = 187 bits (206), Expect = 2e-42 Identities = 394/581 (68%), Gaps = 14/581 (2%) Strand=Plus/Plus Query 4291 TAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAAT 4350 ||||||| || | ||| ||||| || ||||| ||||| || ||||| || | ||| |||| Sbjct 139167 TAGTTTTACCCTGTAAAGAAATGTTCTCCATGAAATCGAAAGGATTCGTAGAGTTATAAT 139226 Query 4351 GTTTTTCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCA 4410 |||| ||| |||| || | | || ||||| || ||||| ||||| || | || Sbjct 139227 GTTTGTCATTACCAAGAGAGACCAAAAGTCTATCAGCAACGAATTCAATATATTGACACA 139286 Query 4411 TGAGTTCGCAGTTAATTCCAATTA-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGT 4469 | | || ||| |||||||| | | | || ||||| |||| | |||| || | ||| Sbjct 139287 TTAATTTAGCGTTCATTCCAATGAGAGCGCA-AGGTAAAGCGTCTCTCAAGAAAGCCTGT 139345 Query 4470 TCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACT 4529 || || || ||||| || || ||| | | ||||| | | | | || | Sbjct 139346 TCAATTCCAACAGCTTCAGTAATGATAGCCAAAACCGTATCTGGATGAGCTCTCTTCTTT 139405 Query 4530 AAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGT 4589 || | || |||||||| || ||||| ||| |||||||| ||||| ||||| | Sbjct 139406 AAATGAGAGAATAATAAACAAGCGAAATCGGTATGTAAACCTTCATCTCTTGAAATCAAT 139465 Query 4590 TCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCA 4649 ||||||||||| || || || ||||||||||||||||| || | ||| || || | ||| Sbjct 139466 TCGTTAGAAAAAGTCAAACCTGGCATTAAACCTCTCTTCTTGATCCAGAAGATTGAAGCA 139525 Query 4650 AATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAAC 4709 || || ||||| || || || ||||| ||||| || || |||||||||| | | | Sbjct 139526 AAAGATCCAGAGAAAAAGATACCTTCGACGGCAGCGAAAGCTACTAATC--TTTCAGCA- 139582 Query 4710 GAGCTGGCTT---TGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCAC 4766 || | |||| |||| || |||||| |||| ||||| | | |||| || ||| Sbjct 139583 AAGGTTGCTTTGGTGTCATTGATCCATCTTAAAGCCCATTCTCCCTTTTGTTTGACGACT 139642 Query 4767 GGAATTGTGTATATAGCGTTAAA---TAATTTACTTTTTTCAAATGGGTCTTGAATATAA 4823 ||||| || | || || | ||| || ||| || || ||| || |||| || Sbjct 139643 GGAATCGTCTCTAAGGCATCAAAGAGGAAAGTACGTTGATC---TGGATCACGAATGTAG 139699 Query 4824 GTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTC 4864 ||||| || ||||| || |||| || || || ||||| Sbjct 139700 GTGTCGATGAGTAGAGAGTAGGTTTCGGAGTGGATGTTTTC 139740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049272105979