Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq23 134 1e-26 >seq23 Length=563827 Score = 134 bits (148), Expect = 1e-26 Identities = 291/432 (67%), Gaps = 14/432 (3%) Strand=Plus/Plus Query 23254 GTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATA---T 23310 || ||||||| ||| || || || ||||| ||||| || ||||| | || ||||| | Sbjct 139169 GTTTTACCCTGTAAAGAAATGTTCTCCATGAAATCGAAAGGATTCGTAGAGTTATAATGT 139228 Query 23311 ACAGCTTTAC-ATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACA 23369 | |||| | || | | ||||| ||||| || || ||||||||||||||||| Sbjct 139229 TTGTCATTACCAAGAGAGACC----AAAAGTCTATCAGCAACGAATTCAATATATTGACA 139284 Query 23370 CATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTT 23429 ||| || | | ||| || || || || || | || || ||||| | Sbjct 139285 CATTAATTTAGCGTTCATTCCAATGAGAGCGCAAGGTAAAGCGTCTCTCAAGAAAGCCTG 139344 Query 23430 TTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACT---TCTTCACTAGGTGGATA 23486 |||||| |||||| || |||| || | | | ||| ||| | || | | Sbjct 139345 TTCAATTCCAACAGCTTCAGTAATGAT---AGCCAAAACCGTATCTGGATGAGCTCTCTT 139401 Query 23487 TTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAAT 23546 ||||||| || |||||||| || ||||| ||||| |||||||| || ||| Sbjct 139402 CTTTAAATGAGAGAATAATAAACAAGCGAAATCGGTATGTAAACCTTCATCTCTTGAAAT 139461 Query 23547 CAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGC 23606 |||||| |||||||| || || ||||||||||| |||| || || ||||| || |||| Sbjct 139462 CAATTCGTTAGAAAAAGTCAAACCTGGCATTAAACCTCTCTTCTTGATCCAGAAGATTGA 139521 Query 23607 AGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACC 23666 |||||| ||||| || || || ||||| || || || || || || || | | | | | Sbjct 139522 AGCAAAAGATCCAGAGAAAAAGATACCTTCGACGGCAGCGAAAGCTACTAATCTTTCAGC 139581 Query 23667 AAATGTTGCATT 23678 ||| ||||| || Sbjct 139582 AAAGGTTGCTTT 139593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487589328200