Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1266 129 7e-25 >seq1266 Length=139507 Score = 129 bits (142), Expect = 7e-25 Identities = 223/317 (70%), Gaps = 14/317 (4%) Strand=Plus/Plus Query 145914 GGGCA-GGTCC-GCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGG--GGTTCC 145969 ||||| || || || |||||||| ||| | |||| | | | || |||| || || Sbjct 47608 GGGCACGGACCTGCAGGGTTCCACGCGCTCAGGATAA---TTCGGCGGTCGGTAGGATCG 47664 Query 145970 T-CTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTC 146028 | |||||||| || ||| ||| ||||| |||||||||| |||| || || | Sbjct 47665 TGCTTGATCTTCCGTATACACTCCGCCAGCTGATCCACGCCCTTCCCCGCATAGTCCGCA 47724 Query 146029 TTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGG 146088 | | ||||| | |||| || || ||||||| |||||| |||||||| ||||| || ||| Sbjct 47725 TCGCAGTCCTCATACGGCGCTCCAAAGTGCCGCCACTGAAACCCGTATACGGGACCGAGG 47784 Query 146089 TCCCCGGGCTCCCTG---TGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTG 146145 || || ||| | | || ||||| ||| | ||||||| || || |||||| Sbjct 47785 TCGCC---CTCACGGCGATGGCCCAGTCCGCGCGACTCGAGGAACGCCTTCGAGCCGTTG 47841 Query 146146 GCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATG 146205 ||||||||||||| | ||| |||| ||||||| || | ||| ||| | || | | | Sbjct 47842 CCGTCCCAGATCTTAATACCCTTCGCAGAGAGCTGCTTCGCGTCGGTGCAGCCGCGCACG 47901 Query 146206 AACCAGAGCAGCTCTTC 146222 |||||||| ||||| || Sbjct 47902 AACCAGAGGAGCTCCTC 47918 Score = 104 bits (114), Expect = 3e-17 Identities = 209/302 (69%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 145924 GCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTC-TTGATCTCCCC 145982 ||||||||||| ||| | |||| || | | | || ||| || || ||||||| || Sbjct 27657 GCCGGGTTCCATGCGCTCAGGATGATTCGGCGG-TCAGTGGGATCATCCTTGATCTTCCG 27599 Query 145983 TATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTA 146042 || ||| ||||| || ||||||| |||| ||||| || | ||||| |||| Sbjct 27598 AATGCACTCCGCCAGCTGATCTACGCCCTTCCCCGTATAATCCGTGTCACAGTCCTCGTA 27539 Query 146043 CGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC-CCCGGGCTCCC 146101 || || || |||| ||||||||| || || | ||| || ||||| ||| || | Sbjct 27538 GAGCGCACCAAAATGCCGCCACTGGAAGCCATACATGGGGCCGAGGTCTCCCTCGCGGCG 27479 Query 146102 TGTGCCCCAGCCCGGCCCGGGC-GAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTG 146160 ||| ||||| || | || | ||| | || ||| | || ||||||||| |||||| Sbjct 27478 -GTGGCCCAGTCCA-CGCGACCTGAGAGATGCCTTGGAGCTGTCGGCGTCCCACATCTTG 27421 Query 146161 ACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCT 146220 || ||| |||||||||||| |||| ||| || | || | || |||| || |||||| Sbjct 27420 ACACCCTTCGCGGAGAGCTGCTTGGCGTCGGTACAGCCGCGAATAGACCACAGTAGCTCT 27361 Query 146221 TC 146222 || Sbjct 27360 TC 27359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590067388275040