Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq495 127 2e-24 seq1041 82.4 8e-11 >seq495 Length=337734 Score = 127 bits (140), Expect = 2e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| |||||||| || || ||||| || || || || | | ||| || ||||| Sbjct 131437 GTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTACGCCCGTCCTCAAGCTG 131496 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 ||||||||| |||| ||||| |||||||| || || || ||||| ||||| |||||| Sbjct 131497 CTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGAATACCTTCCTTGTCCTGGATTTT 131556 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | || | ||||||| | ||| ||||||| ||| | ||||||||||| Sbjct 131557 GGCCTTGACGTTATCGATCGTGTCGGAAGACTCGACCTCAAGGGTAATGGTCTTGCCGGT 131616 Query 139741 CAACGTTTTTACGAATATTTGCATA 139765 |||||| || ||||| || |||||| Sbjct 131617 CAACGTCTTCACGAAGATCTGCATA 131641 >seq1041 Length=164984 Score = 82.4 bits (90), Expect = 8e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||| | ||| ||||| || || ||||| || || || |||| ||| || ||||| Sbjct 54705 GTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCGTCCTCCAGCTG 54764 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || || || |||| || ||||||||||| || || ||||| || ||||| ||| || Sbjct 54765 CTTGCCCGCGAAGATGAGGCGTTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTT 54824 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | || | ||||| | || ||| ||||| | || | |||||||| || Sbjct 54825 CGCCTTCACATTGTCGATGGTGTCAGAGGACTCGACCTCGAGCGTGATGGTCTTGCCAGT 54884 Query 139741 CAACGTTTTTACGAATATTTGCATA 139765 || || || ||||| || |||||| Sbjct 54885 CAGAGTCTTGACGAAGATCTGCATA 54909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496056087779200