Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq792 82.4 4e-11 seq780 82.4 4e-11 >seq792 Length=597381 Score = 82.4 bits (90), Expect = 4e-11 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||| |||||||| | || Sbjct 514167 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAGCTGAGCTAGTCGG 514226 Query 11528 CCGT 11531 |||| Sbjct 514227 CCGT 514230 >seq780 Length=226429 Score = 82.4 bits (90), Expect = 4e-11 Identities = 73/91 (80%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 11445 AAAAATCAAATT--GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||| ||| | |||| | | |||||||||| ||||||| ||||||||||||| | Sbjct 81217 AAAAATAAAACTATGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCA 81158 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533 |||||| |||| |||||||| | ||||| || Sbjct 81157 CGCTCTAACCAGCTGAGCTAGTCGGCCGACG 81127 Score = 82.4 bits (90), Expect = 4e-11 Identities = 70/86 (81%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||||| |||||| | | |||||||||| ||||||| ||||||||||||| || Sbjct 179616 AAAAAATCC--TTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCAC 179673 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||| |||||||| | |||| Sbjct 179674 GCTCTAACCAGCTGAGCTAGTCGGCC 179699 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261487133484976