Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq506 129 2e-24 >seq506 Length=319592 Score = 129 bits (142), Expect = 2e-24 Identities = 397/614 (65%), Gaps = 0/614 (0%) Strand=Plus/Plus Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATT 364254 ||||||||||||||| |||||||||| || || ||||| || || ||||| || Sbjct 219247 AAGTCCAACCAGCAGAACCTTGGTACCATCAAGTCCTCTAACCTGTGCACGGAGATCATC 219306 Query 364255 GAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCG 364314 || ||| |||| ||||| ||||| ||||| || |||||||| || || ||||| ||| || Sbjct 219307 GAGTACTCCGCACCCGATGAGACCGCCGTCTGCAACCTTGCTTCTATTGCGCTGCCGTCG 219366 Query 364315 TTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374 || | | | ||| | | || |||| || | ||||| | | | | Sbjct 219367 TTCATCGAGGGTGGCAAGTACAACTTCCAGAGGCTCCACGACGTCGCAAAGGTCGTCGCG 219426 Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCT 364434 | ||| || || | ||||| ||| || || || |||||||| ||| | || Sbjct 219427 TTCAACCTGAACCGCATCATCGATGCGAACTACTACCCGATTCCTGAGGCCCGGAACTCG 219486 Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATG 364494 || ||||| || || |||||||| | ||||| ||||||||||| |||| || ||| | Sbjct 219487 AACATGCGCCACCGTCCGATTGGCATCGGTGTGCAGGGCCTCGCGGACGCGTTCATGGCG 219546 Query 364495 CTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACA 364554 || | || |||| || ||| || || ||| || || | ||||||| || || Sbjct 219547 CTGCGGCTGCCATTCGACTCGGTCGAGGCACGTAAGCTGAACCTGCAGATCTTCGAGACC 219606 Query 364555 ATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCT 364614 || || || ||| | || || || |||| || |||| |||| Sbjct 219607 ATCTACCACGCTGCAGTCGAGGCGAGCTGCGAGATGGCCAAGGAGCAGGGCCCGTACGAG 219666 Query 364615 ACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG 364674 || || |||| ||| |||||||| || |||||| ||| | ||| ||||||| Sbjct 219667 ACGTACCAGGGCAGCCCGGCGTCGCAGGGCAAGCTCCAGTACGATATGTGGGGTGTCACG 219726 Query 364675 CCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGC 364734 ||| | | || ||| | |||| | || | || ||| | ||||| | Sbjct 219727 CCAACAGACCTCTGGGATTGGGCGAGTCTCAAGGCGAAGGTTGCCCAATATGGTTTGAGG 219786 Query 364735 AACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAAC 364794 ||||| ||| | || || ||||| || || || ||| ||||| || || |||||| Sbjct 219787 AACTCGCTCCTGCTGGCTCCTATGCCTACTGCGTCGACTAGCCAGATTCTGGGCAACAAC 219846 Query 364795 GAGTGCTTCGAACC 364808 || |||||||| || Sbjct 219847 GAATGCTTCGAGCC 219860 Score = 100 bits (110), Expect = 7e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 || || ||||| || | ||||| ||||| ||||| | || || || | |||||| Sbjct 218707 GGCTATTCGAACGGCATCGTTCCTATGCTCCGTGTCTACGATTCGACGGCCCGTTACGTC 218766 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 ||||||||||| |||||| || || || || || || || |||||| |||||| Sbjct 218767 GACCAGGGTGGCAACAAGCGCCCCGGTGCCTTCGCCATCTACCTAGAGCCTTGGCATGCC 218826 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 || | || ||||| || || || || || ||| || |||||||| | || || ||| Sbjct 218827 GACGTCTTCGAGTTCCTCGATCTTCGTAAGAACCATGGTAAAGAGGAGGTTCGCGCTCGT 218886 Query 363934 GATCTGTTCTATGCACTTTGGGTTTCTGACCATTT 363968 || || ||||||||| | ||| || | || | ||| Sbjct 218887 GACCTCTTCTATGCATTGTGGATTCCGGATCTTTT 218921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303332291797832