Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq495 98.7 9e-16 seq606 96.9 3e-15 >seq495 Length=337734 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || | ||||| |||||||||||||||| Sbjct 131868 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAAGTGGAGTCGTCG 131809 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||| || ||| ||||| || || || || || |||| Sbjct 131808 GACACGATTGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACC 131751 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | || || |||||||| || | || || | ||| ||| | ||| |||| Sbjct 131750 AGCAGCGCCTAATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACTCTTTCCGACTACA 131691 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 ||||||| || || || || || || Sbjct 131690 ATATTCAGAAGGAGTCTACCCTTCA 131666 >seq606 Length=277477 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || | ||||| | ||||||||||| || Sbjct 253298 ATGCAGATCTTCGTTAAGACGTTGACGGGCAAGACTATCACTCTTGAAGTGGAGTCTTCG 253357 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| || || || || ||||| || || || Sbjct 253358 GACACGATCGACAACGTCAAGGCGAAGATCCAGGATAAGGAGGGCATTCCGCCCGATCAG 253417 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| |||||||| ||| | ||||| | ||| || | ||| ||||| Sbjct 253418 CAGCGCTTGATTTTCGCCGGCAAGCAACTCGAAGACGGTCGTACCCTTTCCGACTACAAC 253477 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 ||||| || || |||||| || Sbjct 253478 ATTCAGAAGGAGAGCACGCTCCA 253500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433321261207940