Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq993 122 1e-22 seq124 111 2e-19 >seq993 Length=568693 Score = 122 bits (134), Expect = 1e-22 Identities = 168/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 102085 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTA 102144 |||| || || || ||||| | || | || || ||| | ||||| || ||||||||| Sbjct 489287 AGCACCTGTTCGACGCCATTGACACTATCCCCTGCATTAAGAAGAAGGCCGATTGGGCTC 489346 Query 102145 TGAAGTGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 102201 | ||| || || | || || || | ||||| ||||| ||| | || ||||| Sbjct 489347 TCCGCTGGATTTCGGACAAGAACTC-CG--CGTTTGCGGAGCGCCTCGTTGCTTTTGCAG 489403 Query 102202 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAG 102261 || ||||||||||||||||| || |||||| | |||| | |||||||||||||| | Sbjct 489404 CCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTG 489463 Query 102262 GTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 |||||||||| || ||| || || ||||| || ||||| || || ||||| Sbjct 489464 GTCTCATGCCCGGCCTCACGTTTTCGAACGAACTCATCTCCCGCGATGAGGG 489515 Score = 93.3 bits (102), Expect = 5e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 |||| | ||| | || | ||||| || || ||||| || |||||||| || ||||| Sbjct 487221 CTTTTCGGAGAGGCTAGTTGCATTCGCAGCCGTCGAGGGAATTTTCTTCTCCGGCTCCTT 487162 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 | | |||| | |||||||||||||| ||||||||||| || ||| || || ||||| Sbjct 487161 CGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTCACGTTTTCGAACGA 487102 Query 102293 GCTTATCTCTCGTGACGAGGG 102313 || ||||| || || ||||| Sbjct 487101 ACTCATCTCCCGCGATGAGGG 487081 >seq124 Length=125365 Score = 111 bits (122), Expect = 2e-19 Identities = 218/314 (69%), Gaps = 10/314 (3%) Strand=Plus/Minus Query 176764 ATCCGTCATGATCATGAGACGACCATACCG-AAGCT--CGGAAACATCTTGATAGTCCTT 176820 ||||||||| | ||||||||| || || || ||| | ||| | | | || || ||||| Sbjct 98088 ATCCGTCATAAGCATGAGACGGCCGTAACGCAAGGTGCCGGTATC--CGTG-TACTCCTT 98032 Query 176821 ACCCTGTTGAAGACCCAAGATCTTCTTGA-GATCGTTGAA-CTCTTGGTTTGATGTGAGC 176878 || || | |||| ||||||||||| | || |||| ||| | ||| ||| | Sbjct 98031 GTTGTGCTGCAAGCCCATGATCTTCTTGATGTTC--TGAATCTCCTCGTTCTTCATGATC 97974 Query 176879 TGTGTGACAGAGGCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAG 176938 || | ||||| || || ||| |||| |||||||| |||||||||||| || Sbjct 97973 TGGTCGTGCTTCGCATCGCGCACGTTCAGCAACTTTCCACGAAGCGGGAAGACACCGAAG 97914 Query 176939 TGATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCT 176998 | |||||||| || ||| |||||| |||| ||||| | | || |||||||| || Sbjct 97913 TTGTCGCGACCGACGACACCGAGACCAGCAATGGCGAGTGCCCTGGCGGAATCACCTTCC 97854 Query 176999 GTCACGATGAGTGTACACTTGCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAAT 177058 |||| |||||| || || | ||| | || ||| ||||| ||||| || ||| || Sbjct 97853 GTCAAGATGAGCGTGCAGTCGCCGGCTTTCCTCGTTCCCGCGTTGTTGGCGTCAGACAGC 97794 Query 177059 TTGGGAATACCAGT 177072 |||| || ||||| Sbjct 97793 TTGGTCATGCCAGT 97780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620732499158720