Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq993 120 4e-22 >seq993 Length=568693 Score = 120 bits (132), Expect = 4e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 |||||||| ||||| || ||||| || || || ||||| ||||||||||| |||||| Sbjct 489515 CCCTCATCGCGGGAGATGAGTTCGTTCGAAAACGTGAGGCCGGGCATGAGACCACGCTTC 489456 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 || | ||| | |||| | ||| || |||||||||||||||||||| || ||||| Sbjct 489455 TTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGCTGCAAAA 489396 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA-CCATTTCATTGCCCATTT 117470 |||| |||||||| || || | | ||| |||| ||| ||| | ||||| | Sbjct 489395 GCAACGAGGCGCTCCGCAAACGCG-GAGTTCTTGTCCGAAATCCAGCGGAGAGCCCAATC 489337 Query 117471 CGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCT 117520 |||||||||| ||| || || | ||| | ||||| || || | |||| Sbjct 489336 GGCCTTCTTCTTAATGCAGGGGATAGTGTCAATGGCGTCGAACAGGTGCT 489287 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 |||||||| ||||| || ||||| || || || ||||| ||||||||||| |||||| Sbjct 487081 CCCTCATCGCGGGAGATGAGTTCGTTCGAAAACGTGAGGCCGGGCATGAGACCACGCTTC 487140 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 117401 || | ||| | |||| | ||| || ||||||||||| || ||||| || Sbjct 487141 TTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAAATTCCCTCGAC 487190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589971389806240