Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq385 205 2e-47 >seq385 Length=1006 Score = 205 bits (226), Expect = 2e-47 Identities = 299/413 (72%), Gaps = 15/413 (4%) Strand=Plus/Plus Query 22959 GTAGGAAACTTCGCACTCTTCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCC 23018 |||||| || ||||| | || || |||| | |||||| || || || || ||| Sbjct 408 GTAGGACACCTCGCAAGCCTCGTCGGATTGCAGGAACAGCATCTGGGCCACGCCCTCGTT 467 Query 23019 AGCGTAGATCAGTGCCGGGCTTGGTG-TGGTATTGGAAAACTCCAGAGTAAGCGAGCCTT 23077 ||||||||| ||||| | |||| |||| ||||| |||||||| || | || ||| | Sbjct 468 GGCGTAGATCTTGGCCGG-CAGGGTGGTGGTGTTGGAGAACTCCAGGGTCA-CGTGCCCT 525 Query 23078 TCC-ATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGAT 23136 ||| | || || |||||||| |||||||| ||||||||||||||||| ||||| || Sbjct 526 TCCCACTCGGGCTCCAGCGGGGTGACGTTGACGATGATGCCGCAACGGGCATAGGTGCTC 585 Query 23137 TTGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCC 23196 ||||| |||||||| | ||||| ||||||||| ||| | |||| ||| ||| Sbjct 586 TTGCCCAGGCAGATGGTCAGGACGTCGCGCGGAATGCGGAAATATTCCACGGTGCGCGCC 645 Query 23197 AGTGCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCGTAAC 23255 || ||||| ||||||||| ||||| ||| | | || | || | | ||| || Sbjct 646 AGGGCGAAGGAGTTCGGCGGGATGATGCAGAC----GTCGCT--GACC--ACGTCG--AC 695 Query 23256 GAAATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGAAAAC 23315 || | | ||| ||| ||||| ||||| || ||||| || | ||||||||| || Sbjct 696 AAAGCTCTTGTCGTCGAAGTTCTTGGGATCCACCACCGCCGAATGGATGTTGGTGAACAC 755 Query 23316 CTTGAATTCGTTACCGCAACGAATATCGTAGCCGTAGCTGGAAACACCGTAGG 23368 |||||||||||| |||| || | ||||||||||||||||| || ||||||| Sbjct 756 CTTGAATTCGTTGGCGCAGCGCACGTCGTAGCCGTAGCTGGACACCCCGTAGG 808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897579283382080