Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_018856.1 Length=153962 Score E Sequences producing significant alignments: (Bits) Value seq79 179 4e-40 >seq79 Length=1228 Score = 179 bits (198), Expect = 4e-40 Identities = 219/297 (74%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 20838 GTGGTCGCAACAGCTTATACAGCAGACCCAGCAGAGAATGGTGGTACATACGGTGGAGTA 20897 || || ||||||||||| |||||||| ||| || |||||| || | || | | Sbjct 489 GTTGTAGCAACAGCTTACACAGCAGATCCACTTGAAAATGGTTATAAAGCAGGCGACCAA 430 Query 20898 GTTAAAACAGCAACAGGATTCAATTTAACAGCAAATCCTAGCGCAAAAGTAATCGCAGTT 20957 || ||| |||| ||| ||| |||||||| ||||| | | ||| |||| |||||| Sbjct 429 GTAAAATCAGCTTTAGGCCACAACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTT 370 Query 20958 GACCCACGAGTAATTCCATTAGGTTCTAAAGTATACGTAGAAGGTTACGGAGAGGCGATG 21017 || ||| | || |||||||||||||| ||||||| || ||||||||||||| || || Sbjct 369 GATCCAAGTGTCATTCCATTAGGTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATT 310 Query 21018 GCACTAGATACTGGTGGAGCAATCAAAGGTAATCGTATCGATGTATTAATGCCTAATAAC 21077 || |||||||||||||| || ||||| ||| || ||||| |||||||| ||| Sbjct 309 GCTGGTGATACTGGTGGAGCTATTAAAGGAAATAAAATTGATGTTTTAATGCCAGATA-- 252 Query 21078 AAAGT--ATCGAATGATTGGGGACGAAAAACAGTTAATGTTACAATCTTAAACTAGT 21132 || || ||| | | |||||||| |||||||||| |||| | | |||||||||| Sbjct 251 AAGGTTCATCAAGTAGCTGGGGACGTAAAACAGTTACAGTTAAAGTATTAAACTAGT 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492542543821120