Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_018860.1 Length=156176 Score E Sequences producing significant alignments: (Bits) Value seq79 100 3e-16 >seq79 Length=1228 Score = 100 bits (110), Expect = 3e-16 Identities = 196/288 (68%), Gaps = 10/288 (3%) Strand=Plus/Plus Query 142575 TAATACTGTAATCTTAACTTGCTTACGTCCCCA-----TGCATTAGCCTGGGCATCTGTC 142629 ||||||| ||| ||||| ||||||||||| | || | ||| ||||| | Sbjct 202 TAATACTTTAACTGTAACTGTTTTACGTCCCCAGCTACTTGATGAACCTTT--ATCTGGC 259 Query 142630 GGTAAAAGTACGTCAATACGGTTACCTTTGATTGCGCCACCAGTATCTAGAGCCATTGCT 142689 ||||| | ||||| || ||||| || || ||||||||||| ||| |||||| Sbjct 260 ATTAAAA---CATCAATTTTATTTCCTTTAATAGCTCCACCAGTATCACCAGCAATTGCT 316 Query 142690 TCTCCGTAGCCTTCTACATATACTCTAGAACCTAAGGGAATTACTCGTGGGTCTACAGCA 142749 ||||||| ||||| || ||||| | |||||||| ||||| || | ||| || || ||| Sbjct 317 ACTCCGTAACCTTCAACCCATACTTTTGAACCTAATGGAATGACACTTGGATCAACTGCA 376 Query 142750 ATAACTCGTGCGTTTGGATTCTTACTTAAGTTAAATCCAGTCGCTGTTAATACTTGTCCA 142809 || | | ||||||||| ||||||| || |||| | |||||| | Sbjct 377 ATTAGTTTCATGTTTGGATTAGCTGTTAAGTTGTGGCCTAAAGCTGATTTTACTTGGTCG 436 Query 142810 CCGTATGTACCACCATTTTCACTTGGATGTGGTGTATAAGCAGTAGCT 142857 || | || |||||||||| ||||| || ||| ||||| || ||| Sbjct 437 CCTGCTTTATAACCATTTTCAAGTGGATCTGCTGTGTAAGCTGTTGCT 484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499627230818560