Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_018863.1 Length=162596 Score E Sequences producing significant alignments: (Bits) Value seq79 131 2e-25 >seq79 Length=1228 Score = 131 bits (144), Expect = 2e-25 Identities = 207/295 (70%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 143602 TAATTTAGGATTGTAACTTGTACTGTTTTTCTTCCCCAGTCACTAGA--AACCTTCTTGT 143659 || |||| | | ||||| |||||||| | ||||||| ||| || |||||| | | Sbjct 197 TAGTTTAATACTTTAACTGTAACTGTTTTACGTCCCCAGCTACTTGATGAACCTT--TAT 254 Query 143660 TTGGCATCAATACATCGATACGATTACCTTTGATTGCACCGCCTGTATCTCCTGCGATTG 143719 |||||| || ||||| || ||| ||||| || || || || ||||| || || |||| Sbjct 255 CTGGCATTAAAACATCAATTTTATTTCCTTTAATAGCTCCACCAGTATCACCAGCAATTG 314 Query 143720 CTTCTCCATAACCTTCAACATAAATACGAGAACCAAGTGGAATTACTCTAGGGTCAACTG 143779 || |||| ||||||||||| | | ||||| | |||||| || || || ||||||| Sbjct 315 CTACTCCGTAACCTTCAACCCATACTTTTGAACCTAATGGAATGACACTTGGATCAACTG 374 Query 143780 CAACCATTTTCATACTAGGGTTTGCTGATAAGTTATGTCCCATTGCTGTTTTAACTACTC 143839 ||| | |||||| | || || |||| |||||| || || | |||| ||| ||| Sbjct 375 CAATTAGTTTCATGTTTGGATTAGCTGTTAAGTTGTGGCCTAAAGCTGATTTTACTTGGT 434 Query 143840 CACCATATGTACCGCCATTCTCTGCTGGGTCTGCTGTATATGCAGTAGCAACAAC 143894 | || | || ||||| || ||| |||||||| || || || || ||||| Sbjct 435 CGCCTGCTTTATAACCATTTTCAAGTGGATCTGCTGTGTAAGCTGTTGCTACAAC 489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520170903141760