Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq993 120 4e-22 >seq993 Length=568693 Score = 120 bits (132), Expect = 4e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 64982 AGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAA 65041 |||| | || || ||||| | ||| | || || ||| |||||||||| | ||||| Sbjct 489287 AGCACCTGTTCGACGCCATTGACACTATCCCCTGCATTAAGAAGAAGGCCGATTGGGCTC 489346 Query 65042 TGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGT 65100 | ||| ||| |||| ||| | | || || |||||||| |||| ||||| Sbjct 489347 TCCGCTGGATTTCGGACAAGAACTC-CGCGTTTGCGGAGCGCCTCGTTGCTTTTGCAGCC 489405 Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 || |||||||||||||||||||| || ||| | |||| | ||| | |||||||| ||| Sbjct 489406 GTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGT 489465 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGG 65210 |||||||| ||||| || || || ||||| || ||||| |||||||| Sbjct 489466 CTCATGCCCGGCCTCACGTTTTCGAACGAACTCATCTCCCGCGATGAGGG 489515 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 || ||||| || ||||||||||| || ||| | |||| | ||| | |||||||| ||| Sbjct 487190 GTCGAGGGAATTTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGT 487131 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGG 65210 |||||||| ||||| || || || ||||| || ||||| |||||||| Sbjct 487130 CTCATGCCCGGCCTCACGTTTTCGAACGAACTCATCTCCCGCGATGAGGG 487081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596560084714880