Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_021856.1 Length=155631 Score E Sequences producing significant alignments: (Bits) Value seq79 102 8e-17 >seq79 Length=1228 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 48082 AACTTGAAAGCTAACCCGGGACTAAAAGTTATTGCAGTGGACCCTAATGTTATTCCATTA 48141 ||||| | |||||| || | ||| | |||||||| || || | ||| ||||||||| Sbjct 408 AACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTTGATCCAAGTGTCATTCCATTA 349 Query 48142 GGATCAAAAGTTTATGTTGAGGGATACGGAACTGCCGTAGCTGCCGATACGGGTGGAGCT 48201 || |||||||| | ||||| || |||||| || | |||| ||||| ||||||||| Sbjct 348 GGTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATTGCTGGTGATACTGGTGGAGCT 289 Query 48202 ATTAAAGGGAACCGTATTGATGTGTTCATCCCTAGCCAGA-GTGCAGCAGAAAACTTTGG 48260 |||||||| || |||||||| || || || || | | || || || | || || Sbjct 288 ATTAAAGGAAATAAAATTGATGTTTTAATGCC-AGATAAAGGTTCATCAAGTAGCTGGGG 230 Query 48261 GCGTAAAACAGTACAAGTAACGGTTTTAAATTA 48293 ||||||||||| ||| | || ||||| || Sbjct 229 ACGTAAAACAGTTACAGTTAAAGTATTAAACTA 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497883258635360