Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_022088.2 Length=163019 Score E Sequences producing significant alignments: (Bits) Value seq79 140 3e-28 >seq79 Length=1228 Score = 140 bits (154), Expect = 3e-28 Identities = 194/272 (71%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 46929 GTTCTAGCTACAGCATATACATCTCATCCTAGTGAAAACGGTGGTACATACGGAGGACAA 46988 ||| |||| ||||| || ||| | |||| |||||| ||| || | || | ||| Sbjct 489 GTTGTAGCAACAGCTTACACAGCAGATCCACTTGAAAATGGTTATAAAGCAGGCGACCAA 430 Query 46989 GTGTTAACTGCTACAGGGTTTAACTTAAGTAAAAATCCAAACGCTAAAGTTATCGCAGTA 47048 || | | ||| ||| ||||||| ||||||||| ||| | || ||||| Sbjct 429 GTAAAATCAGCTTTAGGCCACAACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTT 370 Query 47049 GACCCAAGAGTAATTCCATTAGGCTCTAAAGTATACGTAGAAGGATACGGAGAAGCAATG 47108 || ||||| || ||||||||||| || ||||||| || ||||| ||||||| |||||| Sbjct 369 GATCCAAGTGTCATTCCATTAGGTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATT 310 Query 47109 GCTCTTGACACTGGCGGTGCCATAAAAGGAAACAGAATCGATGTATTGATGCCATCTAAA 47168 ||| ||| ||||| || || || |||||||| | ||| ||||| || |||||| |||| Sbjct 309 GCTGGTGATACTGGTGGAGCTATTAAAGGAAATAAAATTGATGTTTTAATGCCAGATAAA 250 Query 47169 TCTCAATCTAGCGACTGGGGAAGAAAAACAGT 47200 | ||| || ||||||| | |||||||| Sbjct 249 GGTTCATCAAGTAGCTGGGGACGTAAAACAGT 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521524481551840