Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_022763.1 Length=164297 Score E Sequences producing significant alignments: (Bits) Value seq79 123 3e-23 >seq79 Length=1228 Score = 123 bits (136), Expect = 3e-23 Identities = 209/297 (70%), Gaps = 8/297 (3%) Strand=Plus/Minus Query 47381 GTTGTTGCTACTGCATATACAGCTTCACCAGATGAGAATGGCGGTACATATGGCGGAGTA 47440 ||||| || || || || ||||| ||| ||| ||||| || | |||| | Sbjct 489 GTTGTAGCAACAGCTTACACAGCAGATCCACTTGAAAATGGTTATAAAGCAGGCGACCAA 430 Query 47441 GTTAAAACAGCAATGGGTCACAACCTATCAGCAAATCCTAGTATGAAAATGGTTGCAGTT 47500 || ||| |||| | || |||||| || |||| ||||| | |||||| | |||||||| Sbjct 429 GTAAAATCAGCTTTAGGCCACAACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTT 370 Query 47501 GACCCGAACGTAATCCCACTTGGGTCTCGTATTTATG--TAGAAGGTTACGGAGAAGCAA 47558 || || | || || ||| || ||| || | |||| | ||||||||||||| ||||| Sbjct 369 GATCCAAGTGTCATTCCA-TTAGGT-TCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAA 312 Query 47559 TCGCTGGTGATACTGGCGGCGCAATCAAAGGTAATCGTATCGACGTATTGATGCCAAACA 47618 | |||||||||||||| || || || ||||| ||| || || || || ||||| | | Sbjct 311 TTGCTGGTGATACTGGTGGAGCTATTAAAGGAAATAAAATTGATGTTTTAATGCC--AGA 254 Query 47619 AAAAGGTT--TCTAGCGACTGGGGAAGAAAAACAGTACAAGTTACAATCCTAAATTA 47673 ||||||| || || ||||||| | |||||||| ||||| | | |||| || Sbjct 253 TAAAGGTTCATCAAGTAGCTGGGGACGTAAAACAGTTACAGTTAAAGTATTAAACTA 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525614016322720