Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_023501.1 Length=159590 Score E Sequences producing significant alignments: (Bits) Value seq79 136 4e-27 >seq79 Length=1228 Score = 136 bits (150), Expect = 4e-27 Identities = 204/290 (70%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 143024 ACTAGTTTAAGATTGTAACTTTTACTGTTTTAACGCCCCAGTTGCTAGATTGTGATTTGT 143083 |||||||||| | | ||||| | ||||||||| |||||| | || ||| ||| | Sbjct 195 ACTAGTTTAATACTTTAACTGTAACTGTTTTACGTCCCCAGCTACTTGATGAACCTTTAT 254 Query 143084 TAGGCATTAGTACGTCGATACGATTTCCTTTAATAGCTCCACCAGTATCTGATGCAATTG 143143 ||||||| || || || ||||||||||||||||||||||||||| ||||||| Sbjct 255 CTGGCATTAAAACATCAATTTTATTTCCTTTAATAGCTCCACCAGTATCACCAGCAATTG 314 Query 143144 CTGTTCCGTAACCTTCTACGTGAACCTTAGAACCTAATGGAATCACTCGAGGGTCGACTG 143203 || |||||||||||| || || || |||||||||||||| || | || || |||| Sbjct 315 CTACTCCGTAACCTTCAACCCATACTTTTGAACCTAATGGAATGACACTTGGATCAACTG 374 Query 143204 CGATAATCTTAGCTGATGGATTTGCTGTTAAATCGAATCCTGTAGCTGTTAGAACTCGTC 143263 | || | || |||||| |||||||| | | ||| ||||| | ||| | Sbjct 375 CAATTAGTTTCATGTTTGGATTAGCTGTTAAGTTGTGGCCTAAAGCTGATTTTACTTGGT 434 Query 143264 CACCATAAGTACCTCCGTTTTCGGATGGGTCAGCAGTGTAAGCTGTTGCT 143313 | || || || ||||| ||| || || ||||||||||||||| Sbjct 435 CGCCTGCTTTATAACCATTTTCAAGTGGATCTGCTGTGTAAGCTGTTGCT 484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510551856568000