Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_024207.1 Length=159656 Score E Sequences producing significant alignments: (Bits) Value seq79 174 2e-38 >seq79 Length=1228 Score = 174 bits (192), Expect = 2e-38 Identities = 218/297 (73%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 46586 GTGGTCGCAACAGCTTATACAGCAGACCCAGCAGAGAATGGTGGTACATACGGTGGAGTA 46645 || || ||||||||||| |||||||| ||| || |||||| || | || | | Sbjct 489 GTTGTAGCAACAGCTTACACAGCAGATCCACTTGAAAATGGTTATAAAGCAGGCGACCAA 430 Query 46646 GTTAAAACAGCAACAGGATTTAATTTAACAGCAAATCCTAGCGCAAAAGTAATCGCAGTT 46705 || ||| |||| ||| || |||||||| ||||| | | ||| |||| |||||| Sbjct 429 GTAAAATCAGCTTTAGGCCACAACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTT 370 Query 46706 GACCCACGAGTAATTCCATTAGGTTCTAAAGTATACGTAGAAGGTTACGGAGAGGCAATG 46765 || ||| | || |||||||||||||| ||||||| || ||||||||||||| ||||| Sbjct 369 GATCCAAGTGTCATTCCATTAGGTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATT 310 Query 46766 GCACTAGATACTGGTGGCGCAATCAAAGGTAACCGCATCGATGTATTAATGCCAAACAAC 46825 || ||||||||||| || || ||||| || || ||||| ||||||||| | | Sbjct 309 GCTGGTGATACTGGTGGAGCTATTAAAGGAAATAAAATTGATGTTTTAATGCCAGATA-- 252 Query 46826 AAAGT--ATCGAATGACTGGGGACGAAAAACAGTTAACGTTACAATCTTAAACTAGT 46880 || || ||| | | ||||||||| |||||||||| |||| | | |||||||||| Sbjct 251 AAGGTTCATCAAGTAGCTGGGGACGTAAAACAGTTACAGTTAAAGTATTAAACTAGT 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510763053199360