Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_024213.1 Length=158100 Score E Sequences producing significant alignments: (Bits) Value seq79 149 6e-31 >seq79 Length=1228 Score = 149 bits (164), Expect = 6e-31 Identities = 209/291 (72%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 46248 AGCAACAGCTTATACTGCTGACCCATCCGAGAATGGCGGAACATATGGTGGACGAGTATT 46307 |||||||||||| || || || ||| || ||||| | | || | | |||| Sbjct 484 AGCAACAGCTTACACAGCAGATCCACTTGAAAATGGTTATAAAGCAGGCGACCAAGTAAA 425 Query 46308 AACAGCTACAGGGTTTGACTTAACAGCAAATCCATCGGCTAAAGTTATCGCAGTTGACCC 46367 | ||||| ||| |||||||||| |||||| ||| | || |||||||| || Sbjct 424 ATCAGCTTTAGGCCACAACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTTGATCC 365 Query 46368 ACGAGTAATTCCATTAGGCTCTAAAGTTCATGTAGAAGGATACGGAACAGCAATTGCATC 46427 | | || ||||||||||| || ||||| || ||||| |||||| ||||||||| Sbjct 364 AAGTGTCATTCCATTAGGTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATTGCTGG 305 Query 46428 AGATACTGGTGGAGCTATCAAAGGAAATCGAATCGATGTATTAATGCCTTCTAAATCTCA 46487 ||||||||||||||||| ||||||||| ||| ||||| |||||||| |||| | Sbjct 304 TGATACTGGTGGAGCTATTAAAGGAAATAAAATTGATGTTTTAATGCCAGATAAAGGTTC 245 Query 46488 GTCTAGTAACTGGGG-CGTACGAACAGTAAAAGTAACAATCTTAAACTAGT 46537 || |||| |||||| |||| |||||| | ||| | | | |||||||||| Sbjct 244 ATCAAGTAGCTGGGGACGTA-AAACAGTTACAGTTAAAGTATTAAACTAGT 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505783932617600