Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq495 134 3e-26 seq606 123 5e-23 >seq495 Length=337734 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| || || | ||| || ||||| || ||||| ||||| || || | Sbjct 131640 TACCGCCGCGCAGACGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCGG 131699 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | |||||| || || || || || || |||||||| | || || || || | Sbjct 131700 AAAGAGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCGGGCG 131759 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || ||||| || || ||||| |||||||| || | || | Sbjct 131760 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCCA 131819 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || ||||||||||| || | ||||| ||||| |||||||| Sbjct 131820 CTTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 131868 Score = 111 bits (122), Expect = 3e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| || ||||| || ||||| || || || || || | | | ||||| || || || Sbjct 131437 GTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTACGCCCGTCCTCAAGCTG 131496 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || ||||||||||| || | || ||||| || || || |||||||| || || || || Sbjct 131497 CTTACCAGCAAAGATAAGACGCTGCTGATCCGGGGGAATACCTTCCTTGTCCTGGATTTT 131556 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || || || || ||||| || || || || || | || || |||||||| || Sbjct 131557 GGCCTTGACGTTATCGATCGTGTCGGAAGACTCGACCTCAAGGGTAATGGTCTTGCCGGT 131616 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || || |||||||| Sbjct 131617 CAACGTCTTCACGAAGATCTGCAT 131640 >seq606 Length=277477 Score = 123 bits (136), Expect = 5e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || ||| ||||| ||||| || ||||| || | | || Sbjct 253796 ACGGAGGACAAGGTGGAGGGTGCTTTCCTTCTGGATATTGTAGTCAGAGAGCGTGCGCCC 253737 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || || || || ||||| || | ||||| || ||||| || || ||||| Sbjct 253736 GTCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTT 253677 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || |||||||| || || || || || ||||| || | || |||||||| || || Sbjct 253676 GTCCTGAATCTTGGCCTTCACGTTATCGATCGTGTCCGAGGACTCGACTTCCAACGTGAT 253617 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || | ||||| || ||||||||||| Sbjct 253616 CGTCTTGCCCGTGAGTGTCTTGACGAATATCTGCAT 253581 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 82620 TCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAG 82679 || ||||| || || || || || || | | ||||||||| ||||| || || || || Sbjct 253488 TCCTTCTGAATGTTGTAGTCGGAAAGGGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAA 253429 Query 82680 ATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTT 82739 || | | || ||||| || || || || |||||||| || ||||| || || || || Sbjct 253428 ATCAAGCGCTGCTGATCGGGCGGAATGCCCTCCTTATCCTGGATCTTCGCCTTGACGTTG 253369 Query 82740 TCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACA 82799 || ||||| || || || ||||| | ||| || |||||||| ||||||||||| || Sbjct 253368 TCGATCGTGTCCGAAGACTCCACTTCAAGAGTGATAGTCTTGCCCGTCAACGTCTTAACG 253309 Query 82800 AATATCTGCAT 82810 || |||||||| Sbjct 253308 AAGATCTGCAT 253298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981811148352564