Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_024788.1 Length=162816 Score E Sequences producing significant alignments: (Bits) Value seq79 136 4e-27 >seq79 Length=1228 Score = 136 bits (150), Expect = 4e-27 Identities = 206/293 (70%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 44341 GTTCTAGCTACAGCGTACACAGCAGACCCAGCAGAGAATGGCGGTACATACGGTGGAGTA 44400 ||| |||| ||||| ||||||||||| ||| || ||||| || | || | | Sbjct 489 GTTGTAGCAACAGCTTACACAGCAGATCCACTTGAAAATGGTTATAAAGCAGGCGACCAA 430 Query 44401 GTTAAAACAGCGATGGGTCATAATTTATCAGCAAACCCTAGCATGAAAATGGTTGCAGTT 44460 || ||| |||| | || || || ||| |||| || || | ||||||| | |||||||| Sbjct 429 GTAAAATCAGCTTTAGGCCACAACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTT 370 Query 44461 GACCCTAGAGTAATTCCACTTGGCTCTCGTATCTATGTAGAAGGATATGGTGAAGCAATC 44520 || || || || |||||| | || || | | || ||||| || || | |||||| Sbjct 369 GATCCAAGTGTCATTCCATTAGGTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATT 310 Query 44521 GCGGGAGATACTGGTGGAGCAATCAAAGGTAATCGAATCGATGTATTGATGCCATCTAAA 44580 || || |||||||||||||| || ||||| ||| ||| ||||| || |||||| |||| Sbjct 309 GCTGGTGATACTGGTGGAGCTATTAAAGGAAATAAAATTGATGTTTTAATGCCAGATAAA 250 Query 44581 TCTCAATCTAGCGACTGGGGAAGAAAAACAGTACAAGTTACAATCCTAAATTA 44633 | ||| || ||||||| | |||||||| ||||| | | |||| || Sbjct 249 GGTTCATCAAGTAGCTGGGGACGTAAAACAGTTACAGTTAAAGTATTAAACTA 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520874891912960