Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq506 89.7 5e-13 >seq506 Length=319592 Score = 89.7 bits (98), Expect = 5e-13 Identities = 180/267 (67%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 148105 GTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATT 148164 |||| ||||||||| ||||| ||||| || | | | | ||||||||| | |||| Sbjct 218561 GTCGAGTAGATGCCCTCGATAGAGTCGTCCTTCATACAGACAAGAAAACACGAGCTCATT 218502 Query 148165 TGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGA 148224 || || | | || || || |||||| || || |||||||| || | | | Sbjct 218501 TGAGGGTTTGGGGTGCCAGCGTTGAAAAGCGTTGGTGAGGCGTGCGTGAAGTAGCGCTCA 218442 Query 148225 CTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCG 148284 ||||| | ||||||||||| | | | ||||||||| || ||||| || | ||| Sbjct 218441 GACATCAGGTTATACGTCTCAAGAACATGGTCGATGTCGGATCCATGAATACCGACAGCG 218382 Query 148285 ACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATAT 148344 || |||||||| | |||||||| || || || || | ||||||||| | || || Sbjct 218381 ACACGCATGAGAAGATGCTGTGGCCGCTCAGCCACGCGTCCGTTGATCTTCAAGAGGTAG 218322 Query 148345 CCATTTTCGAGGGTTTTGTAACCAAAG 148371 ||| ||||| ||| | |||||| Sbjct 218321 GAGCGTTCAAGGGTCTTGAAGCCAAAG 218295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476603598051360