Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq506 197 2e-45 seq495 170 2e-37 seq1041 168 8e-37 seq606 147 2e-30 seq576 114 1e-20 seq417 114 1e-20 seq62 107 2e-18 seq993 95.1 1e-14 seq428 82.4 9e-11 >seq506 Length=319592 Score = 197 bits (218), Expect = 2e-45 Identities = 328/474 (69%), Gaps = 0/474 (0%) Strand=Plus/Minus Query 80538 ACCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTA 80597 ||||||||| |||| ||| | |||||| ||||||||| ||| | |||||||||| Sbjct 219720 ACCCCACATATCGTACTGGAGCTTGCCCTGCGACGCCGGGCTGCCCTGGTACGTCTCGTA 219661 Query 80598 CGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTC 80657 |||||||| | |||||||| ||| || | || | || ||||| || ||| ||| Sbjct 219660 CGGGCCCTGCTCCTTGGCCATCTCGCAGCTCGCCTCGACTGCAGCGTGGTAGATGGTCTC 219601 Query 80658 AAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717 |||| | ||||| || |||| |||||| | || | || | ||| Sbjct 219600 GAAGATCTGCAGGTTCAGCTTACGTGCCTCGACCGAGTCGAATGGCAGCCGCAGCGCCAT 219541 Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777 |||| |||| || |||||||| || |||||| | ||||| ||||||||| ||||||| Sbjct 219540 GAACGCGTCCGCGAGGCCCTGCACACCGATGCCAATCGGACGGTGGCGCATGTTCGAGTT 219481 Query 80778 CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAAC 80837 | |||||| ||||| ||||| |||| |||||||| ||||||||||||| | || Sbjct 219480 CCGGGCCTCAGGAATCGGGTAGTAGTTCGCATCGATGATGCGGTTCAGGTTGAACGCGAC 219421 Query 80838 AACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACAAATGCCGG 80897 ||| || || || || || |||| |||| | | | | |||| | || | ||| Sbjct 219420 GACCTTTGCGACGTCGTGGAGCCTCTGGAAGTTGTACTTGCCACCCTCGATGAACGACGG 219361 Query 80898 AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGAT 80957 || | || || || ||||| ||||| ||| || | | | |||||| ||| Sbjct 219360 CAGCGCAATAGAAGCAAGGTTGCAGACGGCGGTCTCATCGGGTGCGGAGTACTCGATGAT 219301 Query 80958 TTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011 |||||||||| ||||| ||||| || ||||| ||||| | |||||| ||||| Sbjct 219300 CTCCGTGCACAGGTTAGAGGACTTGATGGTACCAAGGTTCTGCTGGTTGGACTT 219247 >seq495 Length=337734 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| || || || || || ||||| Sbjct 131868 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAAGTGGAGTCGTCG 131809 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| || || |||||||||||||| || || || |||||| Sbjct 131808 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 131749 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| ||||| || || || ||||| |||||||| | |||||| || | ||||| ||| Sbjct 131748 CAGCGCCTAATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACTCTTTCCGACTACAAT 131689 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || ||||| || ||| | ||||| ||||| || Sbjct 131688 ATTCAGAAGGAGTCTACCCTTCACCTTGTCCTTCGTCTGCGCGGCGG 131642 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||| ||||| || || | |||||||| || Sbjct 131360 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACGATCACGTTGGAGGTTGAATCTTCG 131301 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| || |||||||| |||||||| || || || |||||| Sbjct 131300 GACACAATTGACAACGTGAAGGCGAAGATTCAGGATAAGGAGGGCATACCCCCGGACCAG 131241 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || ||||| || ||||| || ||||||| || || || | || || || Sbjct 131240 CAGCGTTTGATCTTTGCCGGAAAGCAGCTAGAGGATGGCCGCACTCTTTCGGATTACAAC 131181 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||||||||| || || | ||||| || ||||| Sbjct 131180 ATCCAGAAGGAGTCCACTCTTCACCTCGTTCTTCGTCTCCGTGGTGG 131134 Score = 156 bits (172), Expect = 5e-33 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||| | ||||||||||| ||||| |||||||| ||||| Sbjct 131640 ATGCAGATCTTCGTGAAGACGTTGACCGGCAAGACCATTACCCTTGAGGTCGAGTCTTCC 131581 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| ||||| ||||||||||| || ||||| || || ||| Sbjct 131580 GACACGATCGATAACGTCAAGGCCAAAATCCAGGACAAGGAAGGTATTCCCCCGGATCAG 131521 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||||||||| || ||||| | ||||| | | ||||| || Sbjct 131520 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAGGACGGGCGTACGTTGTCGGACTACAAC 131461 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || || ||||| || Sbjct 131460 ATCCAGAAGGAGTCTACCCTTCACCT 131435 Score = 141 bits (156), Expect = 1e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| |||||||| ||||| ||||| || || || ||||| Sbjct 131132 ATGCAAATTTTTGTCAAGACCCTTACCGGGAAGACCATTACGCTCGAAGTCGAGTCGTCG 131073 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| || || ||||| |||||||| || || || || ||| Sbjct 131072 GACACGATTGACAATGTCAAGGCGAAGATCCAGGATAAGGAGGGGATCCCGCCCGATCAG 131013 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| || || ||||| | ||||||| || ||||| | |||||||| Sbjct 131012 CAGCGTCTCATTTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGACTATAAC 130953 Query 27586 GTCCAAAAGGA 27596 | || ||||| Sbjct 130952 ATTCAGAAGGA 130942 Score = 86.0 bits (94), Expect = 7e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || || ||||||||||| || || || || || ||||| |||||||| | |||||| Sbjct 131991 ATCCCCCCCGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACC 131932 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || | ||||| || | || ||||| ||||| || || || ||| | |||||||| || Sbjct 131931 CTCTCGGACTACAACATTCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGTCTTCGTGGC 131872 Query 27631 GG 27632 || Sbjct 131871 GG 131870 >seq1041 Length=164984 Score = 168 bits (186), Expect = 8e-37 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || ||||||||||| ||||| Sbjct 55188 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 55129 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| || || |||||||||||||| |||||||| |||||| Sbjct 55128 GACACCATTGATAACGTCAAGGCAAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAG 55069 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||||| ||| || || | || || || Sbjct 55068 CAGCGTCTTATCTTCGCGGGGAAGCAGCTTGAGGATGGTCGCACTCTTTCCGATTACAAC 55009 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| |||||||||||||| || || Sbjct 55008 ATCCAGAAGGAATCCACTCTCCACCT 54983 Score = 165 bits (182), Expect = 9e-36 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| || || || ||||| ||||| Sbjct 54680 ATGCAGATTTTCGTCAAGACCCTCACTGGGAAGACGATCACGCTCGAGGTCGAGTCTTCG 54621 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| || ||||||||||||||||| ||||| || |||||| Sbjct 54620 GACACGATTGACAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATTCCGCCCGACCAG 54561 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| || ||||||| ||| || || | ||||||||| Sbjct 54560 CAGCGCCTTATTTTCGCGGGCAAGCAGCTGGAGGATGGTCGGACTCTGTCCGACTATAAT 54501 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || |||||||| || Sbjct 54500 ATCCAGAAGGAGTCTACTCTTCACCT 54475 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || || || ||||| ||||| | Sbjct 54908 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACGCTCGAGGTCGAGTCCTCT 54849 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||||| || || |||||||||||||| ||||| || || ||| Sbjct 54848 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAG 54789 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || || || || ||||| || ||||| | || || || | ||||| || Sbjct 54788 CAACGCCTCATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTGTCTGACTACAAC 54729 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | || ||||| ||||| Sbjct 54728 ATCCAGAAGGAGTCAACGCTGCACCTTGTCCTCCGCCTTCGTGGTGG 54682 Score = 86.0 bits (94), Expect = 7e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || ||||| ||||||||||| | || || || || ||||| |||||||| | || || Sbjct 55311 ATCCCTCCCGACCAGCAGCGCTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACT 55252 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || | ||||| || | || ||||| ||||||||||| || ||| | ||||| || ||| Sbjct 55251 CTTTCGGACTACAACATTCAGAAGGAGTCCACTCTTCACCTCGTCCTCCGTCTCCGTGGT 55192 Query 27631 GG 27632 || Sbjct 55191 GG 55190 >seq606 Length=277477 Score = 147 bits (162), Expect = 2e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | || |||||||| || || || ||||| ||||| Sbjct 253017 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAGACCATCACGCTCGAGGTCGAGTCGTCC 253076 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || || |||||||||||||| || ||||| |||||| Sbjct 253077 GACACGATCGATAACGTCAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 253136 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| |||||||||| |||||| || | || || || Sbjct 253137 CAGCGCCTGATCTTTGCGGGCAAGCAGCTCGAGGATGGTCGTACGCTCTCCGATTACAAC 253196 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || || || || || Sbjct 253197 ATCCAGAAGGAGTCGACGCTCCACCT 253222 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || |||||||| || || | || || ||||| Sbjct 253581 ATGCAGATATTCGTCAAGACACTCACGGGCAAGACGATCACGTTGGAAGTCGAGTCCTCG 253640 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || ||||||||||||||||| || ||||| ||||| Sbjct 253641 GACACGATCGATAACGTGAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAA 253700 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| |||||||| | || || || | ||||| ||| Sbjct 253701 CAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGCACGCTCTCTGACTACAAT 253760 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||| ||| || || || ||| | ||||| || || || Sbjct 253761 ATCCAGAAGGAAAGCACCCTCCACCTTGTCCTCCGTCTCCGTGGCGG 253807 Score = 132 bits (146), Expect = 5e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||| | || ||||||||||| |||||||| || ||||| Sbjct 253298 ATGCAGATCTTCGTTAAGACGTTGACGGGCAAGACTATCACTCTTGAAGTGGAGTCTTCG 253357 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || || ||||| |||||||| ||||| || || ||| Sbjct 253358 GACACGATCGACAACGTCAAGGCGAAGATCCAGGATAAGGAGGGCATTCCGCCCGATCAG 253417 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| || || ||||||||||| || | ||||||||| | ||||| || Sbjct 253418 CAGCGCTTGATTTTCGCCGGCAAGCAACTCGAAGACGGTCGTACCCTTTCCGACTACAAC 253477 Query 27586 GTCCAAAAGGA 27596 | || ||||| Sbjct 253478 ATTCAGAAGGA 253488 >seq576 Length=23070 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||||||||| | | || ||||| ||||| Sbjct 14835 ATGCAGATCTTTGTTAAGACCTTGACCGGCAAGACCGTCATGCTCGAGGTCGAGTCGTCC 14894 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || || || || |||| ||||||||| || ||||| |||||| Sbjct 14895 GACACGATCGATGATATCAAAGCGAAGATCCAGGCCAAGGAGGGTATCCCTCCTGACCAG 14954 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 | | | || || ||||| || ||||| |||||||| | |||||| || | || || || Sbjct 14955 CGGTGCCTGATATTTGCGGGAAAGCAGCTCGAGGACGGTCGTACGCTCTCCGATTACAAC 15014 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || || || || || Sbjct 15015 ATCCAGAAGGAGTCGACACTCCACCT 15040 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||| || ||||| | || | |||||| ||||| | || || ||||| Sbjct 15116 ATGCAGGTCTTCGTTCAGACGTTGACGGACAAGACGATTACGTTGGAAGTCGAGTCCTCG 15175 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| || ||||||||||||||| | || ||||| || ||| Sbjct 15176 GACACGATTGACAACGTGAAGGCCAAGATTCAGGACAAGGAGTGCATCCCTCCCGATCAG 15235 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || | || ||||| |||||||| | || || || | |||| || Sbjct 15236 CAGCGTATCATCTTCACGGGCAAGCAGCTCGAGGACGGGCGCACGCTCTCTAACTACAAC 15295 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||| || || || | | | ||||| | ||| || Sbjct 15296 GTCCGGAAGGAGACCATCCTCCACCTTGGCCTTCGTCTCCACGGCGG 15342 >seq417 Length=374089 Score = 114 bits (126), Expect = 1e-20 Identities = 215/321 (67%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 24585 GAGGTCTATAACCTAGGTGCCCAGTCACACGTCAAGCTGTCGTTTGACCAACCCGAGTAC 24644 ||||| || ||||| || || ||||| ||||||||| | || || |||| | |||||| Sbjct 349388 GAGGTGTACAACCTCGGCGCGCAGTCGCACGTCAAGGTCTCCTTCGACCTCTCTGAGTAC 349447 Query 24645 ACGGCCAACGTGGATGCTCTAGGCACCCTAAGAATTCTTGAAGCAATTCGCNNNNNNNNN 24704 || | | |||| || || || ||||| || | | || || || || ||| Sbjct 349448 ACCGGCGACGTCGACGCGCTCGGCACGCTCCGTCTCCTCGACGCGATCCGCACGTGCGGG 349507 Query 24705 NNNNNNTTGAAATTCAGATTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCAG 24764 | || | || || ||||| ||| ||| ||| |||||||| Sbjct 349508 CTCGAGAAGGTCGTCCGGTTCTACCAGGCCTCGACGTCCGAGCTGTACGGCAAGGTCGTC 349567 Query 24765 GAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAG 24824 |||||||| ||| |||||| || || || || ||||| |||||||| || | ||| Sbjct 349568 GAGACGCCGCAGACGGAGAAAACGCCGTTCTACCCGCGCTCGCCGTATGGCGTTGCGAAG 349627 Query 24825 GTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAAC 24884 ||| || ||||||||| | ||||||| | ||||| | || || || || |||||| Sbjct 349628 CTGTACGGGTACTGGATCGTCGTGAACTACAGGGAGGCGTACGGTATGTACGCGTGCAAC 349687 Query 24885 GGAATTCTGTTCAACCATGAG 24905 || || ||||||||||| ||| Sbjct 349688 GGCATCCTGTTCAACCACGAG 349708 >seq62 Length=1243 Score = 107 bits (118), Expect = 2e-18 Identities = 235/347 (68%), Gaps = 9/347 (3%) Strand=Plus/Minus Query 24723 TTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAG 24782 || || |||||| ||| |||||||| || ||||| |||| || || ||| ||| Sbjct 673 TTCTACCAGGCGTCTACCTCGGAGATGTTCGGTAAGGTCCAGGCGATTCCGCAGATCGAG 614 Query 24783 ACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATA 24842 | ||| || ||||||||||| ||||| || || || | ||| | | || ||||||| Sbjct 613 AGCACGCCTTTTTATCCGCGCAGCCCCTACGGCGTGGCCAAGCTCTATGCCCACTGGATG 554 Query 24843 ACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAACGGAATTCTGTTCAACCAT 24902 |||| |||||||| ||| || | || || | | || ||| ||||| |||||||| Sbjct 553 ACCATCAACTACCGCGAGTCCTACGGCATCTTCGGCACCAGCGGCATTCTCTTCAACCAC 494 Query 24903 GAGTCGGAGCGTCGGGGACCTGAATTTGTTACACGAAAGATTACTCTTGGTATTGACCAT 24962 || || || || || | || || || || || ||||| || | || | ||| Sbjct 493 GAATCCCCGCTGCGTGGCCGCGAGTTCGTGACCCGCAAGATCACCGACAGCATCG-CCA- 436 Query 24963 TGGATCAA----GACAAG-GGCACCTATTG-AGCTGGGAAACCTAGATGCCAAACGTGAT 25016 |||||| | |||| | | | || ||||||| ||||| || ||||| || || Sbjct 435 -AGATCAAGGTGGGCAAGCTGGATGTGCTGCAGCTGGGCAACCTCGACGCCAAGCGCGAC 377 Query 25017 TGGGGGCATGCAGCCGACTACGTCGACGCCATGTGGCGCATGCTCCA 25063 ||||| || || |||||||| | |||||||||||||| || Sbjct 376 TGGGGCTTCGCCAAGGAATACGTCGAGGGTATGTGGCGCATGCTGCA 330 >seq993 Length=568693 Score = 95.1 bits (104), Expect = 1e-14 Identities = 341/528 (65%), Gaps = 14/528 (3%) Strand=Plus/Plus Query 64330 TACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCGCCAAGGATCTC 64389 ||||||||||| || |||||||||| |||||| | || || ||||||||||| Sbjct 488992 TACAAGAAAGCAGAGGCGTCCTTCTGGACGGCAGAGGAGATGGACCTTTCCAAGGATCTC 489051 Query 64390 AGCGACTGGGAAAACC---TAAACTCAC-AGGAACAGCACTTCATCAAGTTGGTCCTAGC 64445 |||||| | |||| | || | || | || | || ||||| ||||| || Sbjct 489052 CATGACTGGAACAACCGCCTCAA-TGACGACGAGCGTCATTTCATTTCCCACGTCCTTGC 489110 Query 64446 ATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAATTTTACAAAGGA 64505 ||||| ||| || ||||| ||||| |||||| | | | || | || || Sbjct 489111 CTTCTTTGCAGCATCCGACGGTATTGTCAACGAGAATCTCGTAGAACGGTTCTCCAACGA 489170 Query 64506 TGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAACGAAAGTATTCA 64565 |||||| | ||||| || | ||||| | | ||| | | || | ||||| Sbjct 489171 AGTTCAGGCGGCGGAGGCTCGCTGTTTCTACGGTTTCCAGATTATGATGGAGAACATTCA 489230 Query 64566 TGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAGAAG---GA 64622 ||||||||| || ||| | || |||| | | ||| || | || || || Sbjct 489231 CTCCGAGACGTACTCTCTCCTCATCGACACCTACATCAAGGACCC---CCAGCAGCGCGA 489287 Query 64623 TGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCAT 64682 |||||| || || || ||| | ||| ||| || ||||| || ||||| | Sbjct 489288 GCACCTGTTCGACGCCATTGACACTATCCCCTGCATTAAGAAGAAGGCCGATTGGGCTCT 489347 Query 64683 CCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGT 64739 ||| ||||| | | || |||||| |||| |||| |||||||| || Sbjct 489348 CCGCTGGATTTCGGACAAGAACTCCGCGTTTGCGGAGCGCCTCGTTGCTTTTGCAGCCGT 489407 Query 64740 GGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCT 64799 || || || ||||| || || || ||| ||||| |||||||| || ||||| || || Sbjct 489408 CGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCT 489467 Query 64800 GATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 ||||| || || ||||||||||||| || ||||| || || ||||| Sbjct 489468 CATGCCCGGCCTCACGTTTTCGAACGAACTCATCTCCCGCGATGAGGG 489515 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 64738 GTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGC 64797 || || ||||||||||| || || || ||| ||||| |||||||| || ||||| || Sbjct 487190 GTCGAGGGAATTTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGT 487131 Query 64798 CTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 || ||||| || || ||||||||||||| || ||||| || || ||||| Sbjct 487130 CTCATGCCCGGCCTCACGTTTTCGAACGAACTCATCTCCCGCGATGAGGG 487081 >seq428 Length=363050 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461 || |||||| || || |||||||| || || |||||||| || || || ||||||||||| Sbjct 255213 TAGAATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTC 255272 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | ||| | ||||| || || |||||||||||||| Sbjct 255273 CTCGGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGG 255320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570301303549120