Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_031006.1 Length=161552 Score E Sequences producing significant alignments: (Bits) Value seq79 140 3e-28 >seq79 Length=1228 Score = 140 bits (154), Expect = 3e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 47856 ACTTAACAGCAAATCCATCAGCTAAGATTATCGCAGTTGACCCACGAGTAATTCCACTAG 47915 |||||||||| |||||| || | || |||||||| ||| | || |||||| ||| Sbjct 407 ACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTTGATCCAAGTGTCATTCCATTAG 348 Query 47916 GCTCTAAGGTTCACGTAGAAGGATACGGAACAGCAATCGCTAGTGATACTGGTGGAGCGA 47975 | || || || || ||||| |||||| |||||| ||| |||||||||||||||| | Sbjct 347 GTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATTGCTGGTGATACTGGTGGAGCTA 288 Query 47976 TTAAAGGTAATAGAATTGATGTGCTAATGCCTTCTCAATCTCAGTCAAGTAACTGGGG-C 48034 ||||||| |||| ||||||||| ||||||| | || | ||||||| |||||| | Sbjct 287 TTAAAGGAAATAAAATTGATGTTTTAATGCCAGATAAAGGTTCATCAAGTAGCTGGGGAC 228 Query 48035 GTACGAACTGTTAAAGTAACAATCTTAAACTAGT 48068 ||| ||| |||| ||| | | | |||||||||| Sbjct 227 GTA-AAACAGTTACAGTTAAAGTATTAAACTAGT 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516830156427520