Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_031012.1 Length=162151 Score E Sequences producing significant alignments: (Bits) Value seq79 145 8e-30 >seq79 Length=1228 Score = 145 bits (160), Expect = 8e-30 Identities = 162/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 47026 ACTTAACAGCAAATCCATCAGCTAAAGTTATCGCAGTTGACCCACGAGTAATTCCATTAG 47085 |||||||||| |||||| ||| | || |||||||| ||| | || |||||||||| Sbjct 407 ACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTTGATCCAAGTGTCATTCCATTAG 348 Query 47086 GCTCTAAAGTTCATGTAGAAGGATACGGAACAGCAATTGCATCAGATACTGGTGGAGCTA 47145 | || ||||| || ||||| |||||| ||||||||| |||||||||||||||| Sbjct 347 GTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATTGCTGGTGATACTGGTGGAGCTA 288 Query 47146 TCAAAGGAAATCGAATCGATGTATTAATGCCTTCTAAATCTCAGTCTAGTAACTGGGG-C 47204 | ||||||||| ||| ||||| |||||||| |||| | || |||| |||||| | Sbjct 287 TTAAAGGAAATAAAATTGATGTTTTAATGCCAGATAAAGGTTCATCAAGTAGCTGGGGAC 228 Query 47205 GTACGAACAGTAAAAGTAACAATCTTAAACTAGT 47238 ||| |||||| | ||| | | | |||||||||| Sbjct 227 GTA-AAACAGTTACAGTTAAAGTATTAAACTAGT 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518746925854560