Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_031037.1 Length=163041 Score E Sequences producing significant alignments: (Bits) Value seq79 138 1e-27 >seq79 Length=1228 Score = 138 bits (152), Expect = 1e-27 Identities = 163/216 (75%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 48363 ACTTAACAGCAAATCCCTCAGCA--AAAGTTATCGCAGTTGACCCACGAGTAATTCCACT 48420 |||||||||| ||||| | || ||| | || |||||||| ||| | || |||||| | Sbjct 407 ACTTAACAGCTAATCCA--AACATGAAACTAATTGCAGTTGATCCAAGTGTCATTCCATT 350 Query 48421 AGGCTCTAAAGTTCATGTAGAAGGATACGGAACAGCAATTGCATCAGATACTGGTGGAGC 48480 ||| || ||||| || ||||| |||||| ||||||||| |||||||||||||| Sbjct 349 AGGTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATTGCTGGTGATACTGGTGGAGC 290 Query 48481 TATCAAAGGAAATCGAATCGATGTATTAATGCCTTCTAAATCTCAGTCTAGTAACTGGGG 48540 ||| ||||||||| ||| ||||| |||||||| |||| | || |||| |||||| Sbjct 289 TATTAAAGGAAATAAAATTGATGTTTTAATGCCAGATAAAGGTTCATCAAGTAGCTGGGG 230 Query 48541 -CGTACGAACAGTAAAAGTAACAATCTTAAACTAGT 48575 |||| |||||| | ||| | | | |||||||||| Sbjct 229 ACGTA-AAACAGTTACAGTTAAAGTATTAAACTAGT 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521594880428960