Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_031049.1 Length=161929 Score E Sequences producing significant alignments: (Bits) Value seq79 149 6e-31 >seq79 Length=1228 Score = 149 bits (164), Expect = 6e-31 Identities = 209/291 (72%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 47297 AGCAACAGCATATACTGCCGACCCAGCTGAGAATGGTGGTACGTATGGTGGACGAGTACT 47356 ||||||||| || || || || ||| ||| |||||| || || | | |||| Sbjct 484 AGCAACAGCTTACACAGCAGATCCACTTGAAAATGGTTATAAAGCAGGCGACCAAGTAAA 425 Query 47357 AACAGCTACAGGGTTTGACTTAACAGCGAATCCATCAGCTAAAGTTATCGCAGTTGACCC 47416 | ||||| ||| |||||||||| |||||| ||| | || |||||||| || Sbjct 424 ATCAGCTTTAGGCCACAACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTTGATCC 365 Query 47417 ACGAGTAATTCCATTAGGCTCTAAAGTTCATGTAGAAGGATACGGAACAGCAATTGCATC 47476 | | || ||||||||||| || ||||| || ||||| |||||| ||||||||| Sbjct 364 AAGTGTCATTCCATTAGGTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATTGCTGG 305 Query 47477 AGATACTGGTGGAGCTATCAAAGGAAATCGAATCGATGTATTAATGCCTTCTAAATCTCA 47536 ||||||||||||||||| ||||||||| ||| ||||| |||||||| |||| | Sbjct 304 TGATACTGGTGGAGCTATTAAAGGAAATAAAATTGATGTTTTAATGCCAGATAAAGGTTC 245 Query 47537 GTCTAGTAACTGGGG-TGTACGAACAGTAAAAGTAACAATCTTAAACTAGT 47586 || |||| |||||| ||| |||||| | ||| | | | |||||||||| Sbjct 244 ATCAAGTAGCTGGGGACGTA-AAACAGTTACAGTTAAAGTATTAAACTAGT 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518036537185440