Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grammothele_20lineata_20[genbank_20GCA_5F002150815.2_202017-06-20] 1,276 sequences; 42,856,078 total letters Query= NC_031116.1 Length=163345 Score E Sequences producing significant alignments: (Bits) Value seq79 134 1e-26 >seq79 Length=1228 Score = 134 bits (148), Expect = 1e-26 Identities = 163/216 (75%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 48752 ACTTAACAGCAAATCCATCAGCTAAGATTATCGCAGTTGACCCACGAGTAATTCCACTAG 48811 |||||||||| |||||| || | || |||||||| ||| | || |||||| ||| Sbjct 407 ACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTTGATCCAAGTGTCATTCCATTAG 348 Query 48812 GTTCTAAGGTTCACGTAGAAGGATACGGAACAGCAATCGCTAGTGATACTGGTGGAGCGA 48871 |||| || || || ||||| |||||| |||||| ||| |||||||||||||||| | Sbjct 347 GTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATTGCTGGTGATACTGGTGGAGCTA 288 Query 48872 TTAAAGGTAATAGAATTGATGTGCTAATGCC--ATCAGCTTCTCAGTCTAATAACTGGGG 48929 ||||||| |||| ||||||||| ||||||| || | | ||| || | || |||||| Sbjct 287 TTAAAGGAAATAAAATTGATGTTTTAATGCCAGATAAAGGT-TCA-TCAAGTAGCTGGGG 230 Query 48930 -CGTACGAACTGTTAAAGTAACAATCTTAAACTAGT 48964 |||| ||| |||| ||| | | | |||||||||| Sbjct 229 ACGTA-AAACAGTTACAGTTAAAGTATTAAACTAGT 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522567664912800