Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3 123 5e-23 >seq3 Length=2745113 Score = 123 bits (136), Expect = 5e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 230435 TTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAG 230494 ||||||| | || |||||||||||||| || ||| | ||||||||||| ||||| | Sbjct 2543074 TTCCATGCGGACTCATTGGCATGAACGCGACGCTCATGTGCCAGTACATCGAGTTCGTTG 2543133 Query 230495 CCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTG 230554 |||| || | | ||||| || ||| || || | |||||| | | |||||| || | Sbjct 2543134 CCGATCGTCTGGTGGTTGCCCTCGGTAACCCTAAGATCTACAACGCGACGAACCCTTTCG 2543193 Query 230555 CATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTG 230614 |||||||| | || ||||| ||||| ||||| ||||||||||| ||||| ||| | Sbjct 2543194 ACTTTATGGATATGATCTCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGCGCGTCTCAG 2543253 Query 230615 ACTA-TCAGAGGCCTGGTGTGA 230635 |||| || ||||| || |||| Sbjct 2543254 ACTACTCGAAGGCC-GGCGTGA 2543274 Score = 120 bits (132), Expect = 6e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || ||||||||||| || ||| | ||||||||||| ||||| ||||||||| | Sbjct 2540337 CTCATCGGCATGAACGCCTCGCTCATGTGTCAGTACATCGAGTTCGTCGCCGACCGCCTC 2540278 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || | || || || ||| |||||||| ||||||||| | || ||||| Sbjct 2540277 CTGGTCTCGCTCGGGAACCCGAAGCACTACAACTCGTCGAACCCCTTCGACTTCATGGAC 2540218 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGT 230609 ||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct 2540217 CTCATATCGCTGCAAGGCAAGACCAACTTCTTCGAGAAGCGTGT 2540174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822278722010