Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 167 2e-36 >seq3 Length=2745113 Score = 167 bits (184), Expect = 2e-36 Identities = 370/552 (67%), Gaps = 5/552 (1%) Strand=Plus/Plus Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 ||||| ||||| ||| ||| | |||||||| | |||||| || |||||||| || ||| Sbjct 2540504 AGACACGCGAAGTCGGTATGCATGCCCTCGTCGCGGCTGATGAGCTCGTTAGAGAACGTC 2540563 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 | ||||||||| ||| || ||||| | ||| ||||| | ||||| || || || ||| Sbjct 2540564 AGCCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAATATTGACGCGAAGGATCCGGAGAAG 2540623 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCG-CGTCTTTGTT 17139 || || || || || | || || || | | || || | | || |||||| || Sbjct 2540624 AAGATGCCTTCCACAGCGGCGAAAGCAACGAGCCGCTCCCCAAATACCGACGTCTT-GTC 2540682 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 ||||| | || |||| |||||||| | ||| |||||| || | |||||| Sbjct 2540683 GGATATCCAGCGCAGCGCCCAGTCGGCTTTCTTCTTGATGCAAGGAATGGAGGTTATGGC 2540742 Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 || | | | || || | |||| | || || || ||||||||||| ||| Sbjct 2540743 ATTGAGGAGGTGATCACGCTCGTCAGGGTCTTTGATGTATGTGTCGATGAGTAGCGAGTA 2540802 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319 | |||||||| |||||||| || |||||| || ||||| ||||||| || || || Sbjct 2540803 GGTCTCGGAGTGGATGTTCTCTATCATTATCTGGAAGCCGTAGAAGCATCTTGCCTCAGC 2540862 Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 |||||| || |||| || || | |||||||||||||| ||||||||| || Sbjct 2540863 AGCTTGAACCTCGTTAGAGAAGCGCTCGACGAGATTTTCGTTCACTATGCCGTCGGAGGC 2540922 Query 17380 GGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGA---ACGCG 17436 |||||| || || || | || | ||||| || |||| | | ||| || Sbjct 2540923 GGCGAAGAAAGCTAAGACATTCGAGATGAAGTACCGCTCGTTGGCATTGAGACGGTCGTT 2540982 Query 17437 CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGC 17496 |||||| | | ||| | ||||| || | ||||| ||||| ||| || |||| Sbjct 2540983 CCAGTCTGTGAGATCATGGGATAGGTCGATCTCTTCTACTGTCCAGAAAGATGCTTCTGC 2541042 Query 17497 CTTTTTATACAT 17508 ||||| ||||| Sbjct 2541043 TTTTTTGTACAT 2541054 Score = 154 bits (170), Expect = 2e-32 Identities = 372/561 (66%), Gaps = 3/561 (1%) Strand=Plus/Minus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 |||||||||||| ||| || | |||||||| | |||||| || ||||| || || || Sbjct 2542924 CAGACATGCGAAGTCGGTGTGCATACCCTCGTCACGGCTGATGAGCTCGTTCGAGAACGT 2542865 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 | || ||||| ||| || ||||| | ||| ||||||| ||||| || || || || Sbjct 2542864 GAGGCCAGGCATGAGTCCACGCTTCTTGAGCCAGAATATCGATGCGAAAGAGCCGGAGAA 2542805 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 || |||||||| |||| || || || | | || || ||| | | | | |||| Sbjct 2542804 AAAGATACCCTCTACGGCGGCGAAAGCCACAAGACGCTCAGCGAAAGAAGAGCTCTTGTC 2542745 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 | ||||| | |||| || || || | ||| |||||| || || || ||||| Sbjct 2542744 AGATATCCAGCGCAAAGCCCAGTCTGCCTTCTTCTTGATGCAAGGGATAGTCTCGATGGC 2542685 Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 | || | | || | || |||| | ||||| || ||||| | || ||| Sbjct 2542684 GTCGAACAGGTGTTCGCGCTGCTCGGGGTCCTTGATATAGGTGTCGATCAACAGCGAGTA 2542625 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319 | |||||||| ||||||||||| ||||| || ||||| ||||| || || || || Sbjct 2542624 GGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCAGCGTGCCTCAGC 2542565 Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 ||||| || | |||| || || | || || || || ||||| ||||| ||| Sbjct 2542564 GGCCTGAACCTCGTTGGAGAAACGCTCGACAAGGTTCTCATTGACGATACCGTCCGACGC 2542505 Query 17380 GGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC--CGGTG-TAAGAACGCG 17436 ||| |||||||| | | ||| |||||| | ||||| | || | || | Sbjct 2542504 GGCAAAAAACGCGAGGACATGGGAGATGAAAAAGCGCTCGTCGGCATTGAGACGATTGTT 2542445 Query 17437 CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGC 17496 |||||| | | ||| ||||| | ||||| || || | ||||| || ||| | || Sbjct 2542444 CCAGTCGTGCATATCCTTGGAGAGATCCATCTCCTCTGCAGTCCAGAAGGAAGCTTCCGC 2542385 Query 17497 CTTTTTATACATATTCCAAAT 17517 ||| || ||||| |||||||| Sbjct 2542384 CTTCTTGTACATGTTCCAAAT 2542364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544778396360