Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 132 5e-26 >seq3 Length=2745113 Score = 132 bits (146), Expect = 5e-26 Identities = 369/561 (66%), Gaps = 5/561 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||| ||||||||| || | || ||||| | |||||| || ||||| || || || Sbjct 2542923 AGACATGCGAAGTCGGTGTGCATACCCTCGTCACGGCTGATGAGCTCGTTCGAGAACGTG 2542864 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| ||| || ||||| | ||||||||||| || || || || || || Sbjct 2542863 AGGCCAGGCATGAGTCCACGCTTCTTGAGCCAGAATATCGATGCGAAAGAGCCGGAGAAA 2542804 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || |||||||| || | || ||||| | | || || ||| | | || | || | | Sbjct 2542803 AAGATACCCTCTACGGCGGCGAAAGCCACAAGACGCTCAGCGAAAGAAG-AGCTCTTGTC 2542745 Query 16379 CGA-ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437 || ||||| | |||| || || || | || || ||| || || || ||||| Sbjct 2542744 AGATATCCAGCGCAAAGCCCAGTCTGCCTTCTTCTTGATGCAAGGGATAGTCTCGATGGC 2542685 Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 | |||| | || | || || | ||||| || || |||| | ||| Sbjct 2542684 GTCGAACAGGTGTTCGCGCTGCTCGGGGTCCTTGATATAGGTGTCGATCAACAGCGAGTA 2542625 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 | || ||||| |||||||| || ||||| || || |||||||| || ||||| || Sbjct 2542624 GGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCAGCGTGCCTCAGC 2542565 Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 || || || | | || || || | ||||||||||| ||||||||||| || Sbjct 2542564 GGCCTGAACCTCGTTGGAGAAACGCTCGACAAGGTTCTCATTGACGATACCGTCCGACGC 2542505 Query 16618 AGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAG-AT--GTAAGAATATG 16674 ||||||||||| | | || |||||| | ||||| | || | || | | Sbjct 2542504 GGCAAAAAACGCGAGGACATGGGAGATGAAAAAGCGCTCGTCGGCATTGAGACGATTGTT 2542445 Query 16675 CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGC 16734 ||| || | | ||| ||||| | ||||| || |||| ||||| ||| ||| | || Sbjct 2542444 CCAGTCGTGCATATCCTTGGAGAGATCCATCTCCTCTGCAGTCCAGAAGGAAGCTTCCGC 2542385 Query 16735 CTTTTTATACATTTTCCAAAT 16755 ||| || ||||| |||||||| Sbjct 2542384 CTTCTTGTACATGTTCCAAAT 2542364 Score = 98.7 bits (108), Expect = 1e-15 Identities = 285/434 (66%), Gaps = 6/434 (1%) Strand=Plus/Plus Query 16181 TTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATA 16240 || ||||| | | || ||||||||||||||| ||| | || ||||| | |||||| Sbjct 2540486 TTCAGGTGGTGGAGCAGGAGACACGCGAAGTCGGTATGCATGCCCTCGTCGCGGCTGATG 2540545 Query 16241 AGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCA 16300 || ||||| || || || | ||| ||||| ||| || ||||| | ||||||||| | Sbjct 2540546 AGCTCGTTAGAGAACGTCAGCCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAATATTGAC 2540605 Query 16301 GCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGC- 16359 || || || || || ||||| || || || |||| || ||||| | | || ||| | Sbjct 2540606 GCGAAGGATCCGGAGAAGAAGATGCCTTCCACAGCGGCGAAAGCAACGAGCCGCTCCCCA 2540665 Query 16360 -GTACGTAGCATCTTTATTACGA-ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATA 16417 ||| | | |||| | || ||||| | | |||| |||||||| | || || Sbjct 2540666 AATACCGA-CGTCTT--GTCGGATATCCAGCGCAGCGCCCAGTCGGCTTTCTTCTTGATG 2540722 Query 16418 CAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATAC 16477 ||| || | |||||| || | | | || || | | || | || || Sbjct 2540723 CAAGGAATGGAGGTTATGGCATTGAGGAGGTGATCACGCTCGTCAGGGTCTTTGATGTAT 2540782 Query 16478 GTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCA 16537 || || || |||| ||| | || ||||| ||||||||||| |||||| || || Sbjct 2540783 GTGTCGATGAGTAGCGAGTAGGTCTCGGAGTGGATGTTCTCTATCATTATCTGGAAGCCG 2540842 Query 16538 TAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCA 16597 |||||||||| ||||| || ||| || || | || || || | || || || Sbjct 2540843 TAGAAGCATCTTGCCTCAGCAGCTTGAACCTCGTTAGAGAAGCGCTCGACGAGATTTTCG 2540902 Query 16598 TTCACGATACCGTC 16611 ||||| || ||||| Sbjct 2540903 TTCACTATGCCGTC 2540916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413588129640