Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3 331 1e-85 seq25 131 2e-25 seq1 120 3e-22 seq6 86.0 6e-12 >seq3 Length=2745113 Score = 331 bits (366), Expect = 1e-85 Identities = 471/653 (72%), Gaps = 15/653 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| ||||||||| ||||| || || || |||||||| | |||||| |||| || Sbjct 2542364 ATTTGGAACATGTACAAGAAGGCGGAAGCTTCCTTCTGGACTGCAGAGGAGATGGATCTC 2542423 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | | ||||||| | || | || | | |||||||| ||||||| Sbjct 2542424 TCCAAGGATATGCACGACTGGAACAATCGTCTCAATGCCGACGAGCGCTTTTTCATCTCC 2542483 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || || ||||| ||||| ||||| |||||||| ||||| || ||||||||| Sbjct 2542484 CATGTCCTCGCGTTTTTTGCCGCGTCGGACGGTATCGTCAATGAGAACCTTGTCGAGCGT 2542543 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | ||||| |||| || ||||| || |||||||||||||| ||||| ||| Sbjct 2542544 TTCTCCAACGAGGTTCAGGCCGCTGAGGCACGCTGCTTCTACGGCTTCCAGATTATGATG 2542603 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929 |||||| | ||||| || | || ||| | |||||||| || | | | | | Sbjct 2542604 GAGAACATCCACTCCGAGACCTACTCGCTGTTGATCGACACCTATATCAAGGACCCCGAG 2542663 Query 116930 GAG-GAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 || | ||| | || |||| ||||||||||||| || || ||| |||| ||||||| Sbjct 2542664 CAGCGCGAA-CACC---TGTTCGACGCCATCGAGACTATCCCTTGCATCAAGAAGAAGGC 2542719 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGC-GAGCGCCTGGTGG 117047 || ||||| |||||||||| | | || |||| | ||| || ||||| || |||| Sbjct 2542720 AGACTGGGCTTTGCGCTGGATATCTGACA-AGAGCTCTTCTTTCGCTGAGCGTCTTGTGG 2542778 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | ||||| ||||| ||||| |||| || || ||| |||||| | ||||| ||||||| Sbjct 2542779 CTTTCGCCGCCGTAGAGGGTATCTTTTTCTCCGGCTCTTTCGCATCGATATTCTGGCTCA 2542838 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || || |||||||| ||||| || ||| |||||||||||| | | ||||||| Sbjct 2542839 AGAAGCGTGGACTCATGCCTGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGACGAGG 2542898 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACC-GAGCGCG 117226 || |||| |||||| || ||| |||| |||| |||||| || ||| || | | | Sbjct 2542899 GTATGCACACCGACTTCGCATGTCTGCTTTTCAGCCATTTGAAGCGGCGTCCTCATCCCA 2542958 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCT 117279 || | || | ||||| |||| || || || || ||||||||| ||||| Sbjct 2542959 ACG-TCATCCGCAAGATCATCACTGAGGCTGTTGCGATCGAGCAGGAGTTCCT 2543010 Score = 280 bits (310), Expect = 2e-70 Identities = 409/574 (71%), Gaps = 17/574 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||||| ||||||||||| || || || || |||||||| || || ||| | ||||| Sbjct 2541063 ATCTGGCGAATGTACAAAAAAGCAGAAGCATCTTTCTGGACAGTAGAAGAGATCGACCTA 2541004 Query 116696 TCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||| | || | |||||| || || | || | ||||||||| | |||||| | Sbjct 2541003 TCCCATGATCTCACAGACTGGAACGACCGTCTCAATGCCAACGAGCGGTACTTCATCTCG 2540944 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | || | || || ||||||||| ||||||||| || ||||| ||||| |||||||| Sbjct 2540943 AATGTCTTAGCTTTCTTCGCCGCCTCCGACGGCATAGTGAACGAAAATCTCGTCGAGCGC 2540884 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| || | ||||| || | || ||||| | |||||||||||||| ||||| || Sbjct 2540883 TTCTCTAACGAGGTTCAAGCTGCTGAGGCAAGATGCTTCTACGGCTTCCAGATAATGATA 2540824 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929 |||||| | ||||| || | || ||| ||||||||||| ||| | | || Sbjct 2540823 GAGAACATCCACTCCGAGACCTACTCGCTACTCATCGACACATACATCAAAGACCCTGAC 2540764 Query 116930 GAG---GAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986 ||| || | |||| | || ||||| | || || ||| |||| |||| Sbjct 2540763 GAGCGTGATCACCTCC------TCAATGCCATAACCTCCATTCCTTGCATCAAGAAGAAA 2540710 Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGA-GGCCGCCTTCGGCGAGCGCCTGGT 117045 ||||| ||||||||||||||||| ||| || ||| | | | || || ||||| || || Sbjct 2540709 GCCGACTGGGCGCTGCGCTGGATATCCGACA-AGACGTCGGTATTTGGGGAGCGGCTCGT 2540651 Query 117046 GGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCT 117105 || ||||| || || || ||| ||||||| || || ||||| | ||||| ||||| Sbjct 2540650 TGCTTTCGCCGCTGTGGAAGGCATCTTCTTCTCCGGATCCTTCGCGTCAATATTCTGGCT 2540591 Query 117106 CAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGA 117165 |||||| ||||| ||||||||||| ||||| ||| |||||||||||| | | ||||| Sbjct 2540590 CAAGAAGCGCGGACTCATGCCCGGGCTGACGTTCTCTAACGAGCTCATCAGCCGCGACGA 2540531 Query 117166 GGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTC 117199 ||| ||||| |||||| || ||| | ||| || Sbjct 2540530 GGGCATGCATACCGACTTCGCGTGTCTCCTGCTC 2540497 >seq25 Length=839721 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | || || || || |||||| |||| || || | | Sbjct 326792 ATGCAGATTTTCGTTAAGACGTTGACTGGTAAGACGATCACCCTCGAGGTTGAGTCGTCG 326733 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || |||| || || |||||||| || ||||||| Sbjct 326732 GACACCATCGACAACG-TCAAGGCGAAGATTCAGGATAAGGAGGGCATTCCTCCGGACCA 326674 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| |||||||| |||| || || || ||||||||| Sbjct 326673 GCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTTTCCGACTACAA 326614 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| |||||| || || || ||||| Sbjct 326613 TATCCAGAAGGAGAGCACGCTTCACCTGGTCTTGCG 326578 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || ||| | ||||| || || |||||| | || || || || || Sbjct 327637 ATGCAGATCTTTGTCAAGACGTTGACGGGGAAGACTATCACCCTTGAGGTGGAGTCCTCC 327578 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || |||| || || || ||||| || | |||||| Sbjct 327577 GACACCATCGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCTCCCGACCAG 327518 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||||||||| ||||| || || | ||||| || |||||||| Sbjct 327517 CAGCGCCTAATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCTGACTACAAT 327458 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||||| |||| ||||||| Sbjct 327457 ATCCAGAAGGAGAGCACGTTGCATCT 327432 Score = 105 bits (116), Expect = 7e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || ||| | || || || |||||||| |||| ||||| || || Sbjct 327359 ATGCAGATCTTTGTCAAGACGTTGACCGGGAAGACCATCACTCTCGAGGTCGAGTCCTCC 327300 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || |||| ||||| ||||| |||||| | || ||| Sbjct 327299 GACACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAG 327240 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | ||| || || ||| |||| |||| || || || ||||||||| Sbjct 327239 CAGCGCCTGATTTTCGCTGGAAAGCAGTTGGAGGACGGTCGTACTCTTTCTGACTACAAC 327180 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895 || ||||||||| || || ||||| Sbjct 327179 ATTCAGAAGGAGAGTACCCTCCATCT 327154 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || |||||||| || || || | || || || | | Sbjct 327077 AATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATTACTCTTGAGGTTGAGTCGTC 327018 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| | |||| || |||| ||||| ||||||||||| | |||| Sbjct 327017 GGACACCATCGATAACG-TGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACC 326959 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || ||||||| || ||||| || |||| || | ||||| ||| || |||| Sbjct 326958 AACAGCGTCTCATCTTTGCTGGCAAGCAATTGGAGGATGGTCGCACGCTCTCTGATTACA 326899 Query 40868 ACATCCAGAAGGA 40880 |||| |||||||| Sbjct 326898 ACATTCAGAAGGA 326886 >seq1 Length=3640883 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || ||||| || || || || | || ||||| | || Sbjct 1684085 ATGCAGATCTTTGTCAAGACCCTTACGGGGAAGACGATTACGCTTGAAGTCGAGTCATCC 1684144 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| ||| |||| || || ||||| ||||| | ||||| Sbjct 1684145 GACACAATCGACAACG-TGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCA 1684203 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || || || ||||| || |||| ||||||||| ||||||||| Sbjct 1684204 GCAGCGCCTCATCTTTGCTGGGAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 1684263 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| ||||||||| | || || ||||| || | || || | ||||| Sbjct 1684264 CATTCAGAAGGAGTCTACCCTTCATCTCGTTCTTCGTCTGCGTGGCGG 1684311 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || || ||||| ||||| |||| ||||| | || Sbjct 1684875 ATGCAAATCTTTGTGAAGACCTTGACAGGGAAAACGATCACTCTCGAGGTCGAGTCTTCC 1684934 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| ||||||||||| | || || Sbjct 1684935 GACACCATCGACAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCA 1684993 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| ||| ||||||||||| || |||| || || || || || || Sbjct 1684994 ACAGCGCCTGATCTTCGCCGGCAAACAGCTCGAGGACGGTCGTACTCTTTCTGATTATAA 1685053 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || ||||||||| | || || ||||| || Sbjct 1685054 TATTCAGAAGGAGTCTACTCTTCATCTCGT 1685083 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || ||||| || ||||| | || |||||| | | Sbjct 1684594 ATGCAAATTTTTGTGAAGACTTTGACTGGCAAGACTATCACTCTTGAGGTCGAATCTTCT 1684653 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| ||| || | ||||| ||||| || || | ||||| Sbjct 1684654 GACACAATCGACAACG-TGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCA 1684712 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| || || || || || || | || || || || ||||| Sbjct 1684713 GCAGCGCCTGATTTTCGCTGGAAAGCAACTCGAGGATGGTCGTACACTTTCTGATTACAA 1684772 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||||| | || || ||||| Sbjct 1684773 CATCCAGAAGGAGTCTACTCTTCATCT 1684799 >seq6 Length=2010026 Score = 86.0 bits (94), Expect = 6e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 ||||| | ||||| || || ||||||| ||| ||||| ||||| || || | ||||| Sbjct 1330154 ATCCCTCCCGACCAACAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACT 1330095 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 | | ||| |||||||||||||||||| |||| || ||||| ||| Sbjct 1330094 TTGAGCGATTACAACATCCAGAAGGAGTCCACCCTCCATCTGGTG 1330050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218382089520