Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 134 9e-27 seq25 122 6e-23 >seq1 Length=3640883 Score = 134 bits (148), Expect = 9e-27 Identities = 157/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 34180 CACCA-GGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGT 34238 ||||| |||| | ||||| |||||||| ||||| || ||||| ||| ||| |||| | Sbjct 1685313 CACCAAGGTGAAGGGTACTCTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCT 1685254 Query 34239 CCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGG 34298 |||||||||| || ||||| ||||| |||||||| || || | || |||||||| Sbjct 1685253 CCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCT 1685194 Query 34299 CTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTT 34358 |||||| ||| | | | | || | ||| | ||| ||||| |||| ||||| || | Sbjct 1685193 GGATCTTTGCCTTCACGTTGTCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCT 1685134 Query 34359 TGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || || || || ||||||||||||||||| Sbjct 1685133 TCCCCGTCAGCGTCTTCACAAAGATCTGCAT 1685103 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | || || || || | ||| || ||||| |||||||||||||| Sbjct 1684311 CCGCCACGCAGACGAAGAACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAG 1684252 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || || || ||||| |||||||||||| || Sbjct 1684251 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGG 1684192 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||| || |||||| ||| | | | | || | |||| || ||||| Sbjct 1684191 ATACCCTCCTTATCCTGAATCTTTGCCTTCACGTTGTCGATTGTGTCGGATGACTCGACT 1684132 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||| || || || || || || || || |||||||||||||| Sbjct 1684131 TCAAGCGTAATCGTCTTCCCCGTAAGGGTCTTGACAAAGATCTGCAT 1684085 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 34180 CACCAGG-TGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGT 34238 ||||| | || | |||| || ||||| |||||||| || || || ||| | || | Sbjct 1684804 CACCAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCT 1684745 Query 34239 CCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGG 34298 | | ||||| || |||||||| || ||||||||||| || | | ||||||||| Sbjct 1684744 CGAGTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 1684685 Query 34299 CTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTT 34358 |||||| ||| | | | | || | || | |||||||| || | ||||| || | Sbjct 1684684 GGATCTTTGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCT 1684625 Query 34359 TGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || | ||| |||||||| || ||||| Sbjct 1684624 TGCCAGTCAAAGTCTTCACAAAAATTTGCAT 1684594 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || ||||| | || || || || | |||| || ||||| || || || || || Sbjct 1685102 TCCACCACGCAGACGAAGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCAGA 1685043 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| |||| || | ||| ||||| ||||| || || ||||| || || || Sbjct 1685042 AAGAGTACGACCGTCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGAGG 1684983 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | | | | || | |||| || ||||| Sbjct 1684982 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGAC 1684923 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| ||||| || || | || ||||||||||| ||||| Sbjct 1684922 CTCGAGAGTGATCGTTTTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 >seq25 Length=839721 Score = 122 bits (134), Expect = 6e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 34193 GTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCT 34252 ||||| || ||||| ||||||||||| || || ||| |||| ||||||||||| || Sbjct 327163 GTACTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAACTGCTTTCCA 327222 Query 34253 GCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT 34312 |||||||| || |||||||| || ||| | | ||||||||| ||||| ||| Sbjct 327223 GCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTC 327282 Query 34313 AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTT 34372 | || | | || | |||| || ||||| || | |||||||| || ||||| | || Sbjct 327283 ACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCGGTCAACGTC 327342 Query 34373 TTCACAAAGATCTGCAT 34389 || |||||||||||||| Sbjct 327343 TTGACAAAGATCTGCAT 327359 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || || ||||| || | || |||||||| | || || || ||||| || ||||||||| Sbjct 326563 AACCCACCGCGGAGACGCAAGACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCG 326622 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 || ||| ||| |||| |||| ||||||||| || || || || ||||||||||| Sbjct 326623 GAAAGCGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGA 326682 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | || |||||| || ||||| ||| | | | | || | || | ||| || Sbjct 326683 GGAATGCCCTCCTTATCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCA 326742 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | ||||| || || || || | || || || || |||||||| Sbjct 326743 ACCTCGAGGGTGATCGTCTTACCAGTCAACGTCTTAACGAAAATCTGCAT 326792 Score = 93.3 bits (102), Expect = 3e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||| | ||| ||||| ||||| |||||||| || || ||| || | || ||||| Sbjct 326871 AGGTGGAGAGTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAAT 326930 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 |||||||| || || ||||| ||||| ||||| || | || ||||||||| ||| Sbjct 326931 TGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATC 326990 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 || ||| | | | || | || | ||| || || || | || || || ||||| Sbjct 326991 TTCGCCTTCACGTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCC 327050 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || || ||||||||||| Sbjct 327051 GTCAGGGTCTTGACGAAGATCTGCAT 327076 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 || || || || || || ||||| || |||||||| || || ||| | || || | | Sbjct 327432 AGATGCAACGTGCTCTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGC 327491 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 |||||||| ||||| || || |||||||||||| || | || ||||| || ||| Sbjct 327492 TGCTTGCCCGCGAAGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGAATC 327551 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 || ||| | || | | || | |||| || || || || | ||||| || || || Sbjct 327552 TTCGCCTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTCCCC 327611 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || || |||||||||||||| Sbjct 327612 GTCAACGTCTTGACAAAGATCTGCAT 327637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071499945120