Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq11 104 5e-17 >seq11 Length=1765784 Score = 104 bits (114), Expect = 5e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 248884 GAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAG 248943 ||||| |||||| ||||||||||| ||||| || || |||||| ||| || ||| Sbjct 1056307 GAACGCCCTCAGCATATGTTGATGCGTGTGGCAGTGGGTATTCACGGCTCTGATATTGAG 1056366 Query 248944 AGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACG 249003 ||| ||||||| || | | ||| ||| ||| | || ||||| | ||||| Sbjct 1056367 CGCGCCATCGAGACCTATAACCTTATGTCCGAA-GCTTCTTCACTCATGCATCGCCGACT 1056425 Query 249004 CTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAA 249063 |||||||| || |||||| |||| ||| ||||||| ||||| | || |||| | Sbjct 1056426 CTCTTCAATGCGGGTACCCCCAACCCTCAAATGAGCTCCTGCTTCTTGGTTTGCATGAAG 1056485 Query 249064 GACGACTCTGTCGACGGCATTTATGACAC 249092 |||||||| | || ||||| |||||||| Sbjct 1056486 GACGACTCCATAGAAGGCATCTATGACAC 1056514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764652780736