Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-13 >seq3 Length=2745113 Score = 89.7 bits (98), Expect = 4e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 || ||| | || || || ||||| |||||| || | || || || || || ||| | ||| Sbjct 2540658 CGGCTCGTTGCTTTCGCCGCTGTGGAAGGCATCTTCTTCTCCGGATCCTTCGCGTCAATA 2540599 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||| ||||| || |||||||| ||| || |||| || |||||| | || ||| Sbjct 2540598 TTCTGGCTCAAGAAGCGCGGACTCATGCCCGGGCTGACGTTCTCTAACGAGCTCATCAGC 2540539 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTG 22899 || ||||| || | || ||||| || ||| | ||| Sbjct 2540538 CGCGACGAGGGCATGCATACCGACTTCGCGTGTCTCCTG 2540500 Score = 89.7 bits (98), Expect = 4e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| |||| || || || || || || || | || || || || || || | ||| Sbjct 2542769 CGTCTTGTGGCTTTCGCCGCCGTAGAGGGTATCTTTTTCTCCGGCTCTTTCGCATCGATA 2542828 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||| ||||| ||| |||||||| || | |||| || |||||| | || ||| Sbjct 2542829 TTCTGGCTCAAGAAGCGTGGACTCATGCCTGGCCTCACGTTCTCGAACGAGCTCATCAGC 2542888 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCA 22907 |||||||| ||| | ||| ||||| || ||| |||| || || || Sbjct 2542889 CGTGACGAGGGTATGCACACCGACTTCGCATGTCTGCTTTTCAGCCA 2542935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233048617181