Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12]
127 sequences; 39,289,314 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 8e-16
>seq1
Length=3640883
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| |||||||| | | || | ||| | ||| |||||| || | ||| ||||| ||
Sbjct 1685101 CCACCACGCAGACGAAGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCAGAA 1685042
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| ||||| |||| || | ||||||||||| || |||| ||||||||||| | ||
Sbjct 1685041 AGAGTACGACCGTCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGAGGG 1684982
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| || || || || |||| | | ||||| || | | |||||| || ||||||
Sbjct 1684981 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACC 1684922
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || ||||| || || | || |||||||| ||||||||
Sbjct 1684921 TCGAGAGTGATCGTTTTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/211 (69%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 42900 CACCAA-ATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGT 42958
|||||| ||| | ||| |||||| || | |||||||| || | |||||| | || |
Sbjct 1684804 CACCAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCT 1684745
Query 42959 CCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGC 43018
| | ||| || || || ||||||| ||||| || || | || | ||| || || ||
Sbjct 1684744 CGAGTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 1684685
Query 43019 TGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTT 43078
|||| | || || || | | |||||| || ||||| || | || ||||| |
Sbjct 1684684 GGATCTTTGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCT 1684625
Query 43079 TTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| || || | ||| |||||||||||||||||
Sbjct 1684624 TGCCAGTCAAAGTCTTCACAAAAATTTGCAT 1684594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381369009711366
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |