Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3 187 3e-42 >seq3 Length=2745113 Score = 187 bits (206), Expect = 3e-42 Identities = 379/559 (68%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| ||||| ||| |||| ||||| || | || || | ||||| || ||||| || Sbjct 2540506 ACACGCGAAGTCGGTATGCATGCCCTCGTCGCGGCTGATGAGCTCGTTAGAGAACGTCAG 2540565 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 |||||||| || || ||||| || ||||| ||||| ||||| || ||||| || ||||| Sbjct 2540566 CCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAATATTGACGCGAAGGATCCGGAGAAGAA 2540625 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCAC--TGTCATG 42240 ||| ||||| || || || || |||| || | ||| ||| | |||| | |||| Sbjct 2540626 GATGCCTTCCACAGCGGCGAAAGCAACGAGCCGCTCCCCAAATACCGACGTCTTGTCGGA 2540685 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 |||||| | ||||| ||||| ||||| || | ||||| || | ||||||||| Sbjct 2540686 TATCCAGCGCAGCGCCCAGTCGGCTTTCTTCTTGATGCAAGGAATGGAGGTTATGGCATT 2540745 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 | ||| | | || | | ||||| | ||||| ||||| | || || | Sbjct 2540746 GAGGAGGTGATCACGCTCGTCAGGGTCTTTGATGTATGTGTCGATGAGTAGCGAGTAGGT 2540805 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 || || || ||||| || || ||||| || |||||||| ||||| ||||| | | | Sbjct 2540806 CTCGGAGTGGATGTTCTCTATCATTATCTGGAAGCCGTAGAAGCATCTTGCCTCAGCAGC 2540865 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480 || || || || | || || || | | ||||||||||||||| ||||| ||| || Sbjct 2540866 TTGAACCTCGTTAGAGAAGCGCTCGACGAGATTTTCGTTCACTATGCCGTCGGAGGCGGC 2540925 Query 42481 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTATTCC 42536 || || || || |||| || || || |||| || || | | |||| Sbjct 2540926 GAAGAAAGCTAAGACATTCGAGATGAAGTACCGCTCGT-TGGCATTGAGACGGTCGTTCC 2540984 Query 42537 AATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596 | || ||| ||| | |||| || | |||||||| ||||| || ||||||||||| | Sbjct 2540985 AGTCTGTGAGATCATGGGATAGGTCGATCTCTTCTACTGTCCAGAAAGATGCTTCTGCTT 2541044 Query 42597 TTTTATACATATTCCAGAT 42615 |||| ||||| |||||| Sbjct 2541045 TTTTGTACATTCGCCAGAT 2541063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138134566520