Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 170 3e-37 >seq3 Length=2745113 Score = 170 bits (188), Expect = 3e-37 Identities = 382/564 (68%), Gaps = 20/564 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| | |||||||| ||||| | || ||||| ||||| | || ||| | ||||| Sbjct 2542364 ATTTGGAACATGTACAAGAAGGCGGAAGCTTCCTTCTGGACTGCAGAGGAGATGGATCTC 2542423 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTAT--AT 125136 |||||||| || |||| ||| | | |||| | | || | || |||| | || | || Sbjct 2542424 TCCAAGGATATGCACGACTGGAACAATCGTCTCAATG---CCGA-CGAGCGCTTTTTCAT 2542479 Query 125137 CGCACATTT--TGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 | | ||| | | || || ||||||| || || || |||||||| || || || || || Sbjct 2542480 CTCCCATGTCCTCGCGTTTTTTGCCGCGTCGGACGGTATCGTCAATGAGAACCTTGTCGA 2542539 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTTTACGGATTCCAAAT 125251 || ||||| | ||| | || || |||| ||||| ||||| ||||| || Sbjct 2542540 G-CGTTTCTCCAACGAGGTT--CAGGCCGCTGAGGCACGCTGCTTCTACGGCTTCCAGAT 2542596 Query 125252 CATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA 125311 ||||| |||||| | ||||| || | ||||| |||| |||| || || || Sbjct 2542597 TATGATGGAGAACATCCACTCCGAGACCTACTCGCTGTTGATCGACACCTATATCAAGGA 2542656 Query 125312 TCC---GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAA 125368 || ||| || ||||| || || |||| ||||| || | || | || || Sbjct 2542657 CCCCGAGCAGCGCGAACACCTGTTCG---ACGCCATCGAGACTATCCCTTGCATCAAGAA 2542713 Query 125369 AAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACT 125428 ||||| | |||| | || ||||| |||| | | ||||| | ||| || | || Sbjct 2542714 GAAGGCAGACTGGGCTTTGCGCTGGATATCTGACAAGAGCTCTTCTTTCGCTGAGCGTCT 2542773 Query 125429 GGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTG 125488 ||||| ||||||||||||||||| ||||| || || || ||| || | || || || Sbjct 2542774 TGTGGCTTTCGCCGCCGTAGAGGGTATCTTTTTCTCCGGCTCTTTCGCATCGATATTCTG 2542833 Query 125489 GCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGA 125548 |||||||||||| ||||||||||| || || ||| | |||||| | || || || Sbjct 2542834 GCTCAAGAAGCGTGGACTCATGCCTGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGA 2542893 Query 125549 CGAGGGCCTACACTGTGACTTTGC 125572 |||||| | ||| ||||| || Sbjct 2542894 CGAGGGTATGCACACCGACTTCGC 2542917 Score = 154 bits (170), Expect = 2e-32 Identities = 367/545 (67%), Gaps = 16/545 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||||| || | || || || ||||| || |||||| |||| || Sbjct 2541063 ATCTGGCGAATGTACAAAAAAGCAGAAGCATCTTTCTGGACAGTAGAAGAGATCGACCTA 2541004 Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 ||| | || || || ||| | ||| ||| | | || | ||||| | || || || Sbjct 2541003 TCCCATGATCTCACAGACTGGAACGAC-CGTCTCAATGCCAACGAGCGGTACTTCATCTC 2540945 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACAC 125196 | | | || || ||||| |||| |||||| || || || ||||| ||||| || || | Sbjct 2540944 GAATGTCTTAGCTTTCTTCGCCGCCTCCGACGGCATAGTGAACGAAAATCTCGTCGAG-C 2540886 Query 125197 GATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 | |||||| | ||| | | | |||| ||||| ||||| ||||| || |||| Sbjct 2540885 GCTTCTCTAACGAGGTTCAAGCTGCTGAGGCAAGATGCTTCTACGGCTTCCAGATAATGA 2540826 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGC 125316 | |||||| | ||||| || | ||||| ||| || |||| ||||| || || Sbjct 2540825 TAGAGAACATCCACTCCGAGACCTACTCGCTACTCATCGACACATACATCAAAGACCCTG 2540766 Query 125317 AA---CGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 | ||| | ||| | ||| || || || | | | || | || || || | Sbjct 2540765 ACGAGCGTGATCACCTCCTC---AATGCCATAACCTCCATTCCTTGCATCAAGAAGAAAG 2540709 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCG---TACGCCGACAGACTGG 125430 | | |||| | | || ||||| || ||||||| | ||| | | || | || | Sbjct 2540708 CCGACTGGGCGCTGCGCTGGAT--ATC-CGACAAGACGTCGGTATTTGGGGAGCGGCTCG 2540652 Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGC 125490 | || |||||||| || || ||||||||||| || || || ||| | || || |||| Sbjct 2540651 TTGCTTTCGCCGCTGTGGAAGGCATCTTCTTCTCCGGATCCTTCGCGTCAATATTCTGGC 2540592 Query 125491 TCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACG 125550 ||||||||||||||||||||||||| |||||| | ||||||| | || || |||| Sbjct 2540591 TCAAGAAGCGCGGACTCATGCCCGGGCTGACGTTCTCTAACGAGCTCATCAGCCGCGACG 2540532 Query 125551 AGGGC 125555 ||||| Sbjct 2540531 AGGGC 2540527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058023568520