Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12]
127 sequences; 39,289,314 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq25 105 6e-18
seq1 82.4 6e-11
>seq25
Length=839721
Score = 105 bits (116), Expect = 6e-18
Identities = 148/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCT 48581
||| || || |||||||| ||||||||||| |||| || || || ||||||||| ||
Sbjct 327156 ATGGAGGGTACTCTCCTTCTGAATGTTGTAGTCAG-AAAGAGTACGACCGTCCTCCAACT 327214
Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641
|||| || || |||| | ||||||||||| || | || ||||||||| ||| |
Sbjct 327215 GCTTTCCAGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCT 327274
Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701
|| ||| | | | ||||| |||| ||||| ||||| || ||||| || ||||
Sbjct 327275 TCGCCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCGG 327334
Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726
| | || || ||||| ||||||||
Sbjct 327335 TCAACGTCTTGACAAAGATCTGCAT 327359
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/206 (70%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
||||| ||||||||||| || || ||||| || | || || || |||||||||||||
Sbjct 326590 TGAAGCGTGCTCTCCTTCTGGATATTGTAGTC-GGAAAGCGTACGACCGTCCTCCAGCTG 326648
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| ||| | | || | |||||||| ||| || | | ||||| ||| ||| ||
Sbjct 326649 CTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGAATCTT 326708
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
| ||||| | | || ||||| || | ||||| ||||| || || || |||||
Sbjct 326709 CGCCTTGACGTTGTCG--ATGGTGTCCGACGACTCAACCTCGAGGGTGATCGTCTTACCA 326766
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || || || |||||||||||
Sbjct 326767 GTCAACGTCTTAACGAAAATCTGCAT 326792
>seq1
Length=3640883
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
||||| || ||||| || |||||||| ||||| | | ||| ||||||||| ||||
Sbjct 1685305 TGAAGGGTACTCTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCTCCAACTGC 1685246
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| || || | || | ||||||||||||| || | | |||||||||| || ||
Sbjct 1685245 TTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTTT 1685186
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||| | | || ||||| | ||||| ||| | || || || || || ||
Sbjct 1685185 GCCTTCACGTTGTCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCTTCCCCGTC 1685126
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
|| || |||||||| ||||||||
Sbjct 1685125 AGCGTCTTCACAAAGATCTGCAT 1685103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250547982127
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |