Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq25 105 6e-18 seq1 82.4 6e-11 >seq25 Length=839721 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCT 48581 ||| || || |||||||| ||||||||||| |||| || || || ||||||||| || Sbjct 327156 ATGGAGGGTACTCTCCTTCTGAATGTTGTAGTCAG-AAAGAGTACGACCGTCCTCCAACT 327214 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| || || |||| | ||||||||||| || | || ||||||||| ||| | Sbjct 327215 GCTTTCCAGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCT 327274 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 || ||| | | | ||||| |||| ||||| ||||| || ||||| || |||| Sbjct 327275 TCGCCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCGG 327334 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 | | || || ||||| |||||||| Sbjct 327335 TCAACGTCTTGACAAAGATCTGCAT 327359 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 ||||| ||||||||||| || || ||||| || | || || || ||||||||||||| Sbjct 326590 TGAAGCGTGCTCTCCTTCTGGATATTGTAGTC-GGAAAGCGTACGACCGTCCTCCAGCTG 326648 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| | | || | |||||||| ||| || | | ||||| ||| ||| || Sbjct 326649 CTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGAATCTT 326708 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 | ||||| | | || ||||| || | ||||| ||||| || || || ||||| Sbjct 326709 CGCCTTGACGTTGTCG--ATGGTGTCCGACGACTCAACCTCGAGGGTGATCGTCTTACCA 326766 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || ||||||||||| Sbjct 326767 GTCAACGTCTTAACGAAAATCTGCAT 326792 >seq1 Length=3640883 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| || ||||| || |||||||| ||||| | | ||| ||||||||| |||| Sbjct 1685305 TGAAGGGTACTCTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCTCCAACTGC 1685246 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || || | || | ||||||||||||| || | | |||||||||| || || Sbjct 1685245 TTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTTT 1685186 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||| | | || ||||| | ||||| ||| | || || || || || || Sbjct 1685185 GCCTTCACGTTGTCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCTTCCCCGTC 1685126 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || || |||||||| |||||||| Sbjct 1685125 AGCGTCTTCACAAAGATCTGCAT 1685103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250547982127