Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq25 91.5 1e-13 >seq1 Length=3640883 Score = 109 bits (120), Expect = 5e-19 Identities = 154/213 (72%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 94798 CACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATC 94854 ||||||| || | |||||| ||||| || | ||| ||||| | ||||| || ||| Sbjct 1684804 CACCAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAG--AAAGTGTACGACCATC 1684747 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 ||| || || ||||| | || || | | ||||| || ||||||||||| || ||||| Sbjct 1684746 CTCGAGTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 1684687 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | || |||||||| ||| | ||| ||||||| ||||| |||| ||||| || Sbjct 1684686 CTGGATCTTTGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGT 1684627 Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| | ||| |||||||| || ||||| Sbjct 1684626 CTTGCCAGTCAAAGTCTTCACAAAAATTTGCAT 1684594 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| ||||| || | ||| || ||| | ||| | ||||| ||||| || || Sbjct 1684281 GTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCA 1684222 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | | ||||| || ||||| ||||| || || || | ||| |||||||| Sbjct 1684221 GCAAAGATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGAATCTTTGCCTTC 1684162 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | ||| ||||| | ||||| |||| ||| || || || || ||||| || Sbjct 1684161 ACGTTGTCGATTGTGTCGGATGACTCGACTTCAAGCGTAATCGTCTTCCCCGTAAGGGTC 1684102 Query 94991 TTCACAAAGATCTGCAT 95007 || |||||||||||||| Sbjct 1684101 TTGACAAAGATCTGCAT 1684085 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| ||| ||||| | ||||| | | |||||||| |||||||| ||||| ||| Sbjct 1685257 TCCTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTG 1685198 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || |||||||| ||| | | | || || | ||||| || | ||||| Sbjct 1685197 TCCTGGATCTTTGCCTTCACGTTGTCAATTGTATCCGACGACTCGACCTCCAAGGTGATA 1685138 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||||||||| Sbjct 1685137 GTCTTCCCCGTCAGCGTCTTCACAAAGATCTGCAT 1685103 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTT 94867 |||||| ||||| || | |||||||| | || || || ||||| |||||||| Sbjct 1685072 AGTAGACTCCTTCTGAATATTATAATCAG--AAAGAGTACGACCGTCCTCGAGCTGTTTG 1685015 Query 94868 CCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCC 94927 ||| | ||||| | | || ||||| ||||| || || || ||||| | || || ||| Sbjct 1685014 CCGGCGAAGATCAGGCGCTGTTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCC 1684955 Query 94928 TTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGA 94987 |||||| | ||| ||||| | ||||| || | ||||| ||||| || || | Sbjct 1684954 TTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATCGTTTTCCCTGTCAAG 1684895 Query 94988 GTTTTCACAAAGATCTGCAT 95007 || ||||||||||| ||||| Sbjct 1684894 GTCTTCACAAAGATTTGCAT 1684875 >seq25 Length=839721 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || | ||||||| | ||||| || |||||||| ||||| || Sbjct 327482 ATCCTCGAGCTGCTTGCCCGCGAAGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTT 327541 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||| || |||||||| | ||| ||||| | | || || |||| ||||| Sbjct 327542 ATCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGAT 327601 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || | || || |||||||||||||||| Sbjct 327602 AGTCTTCCCCGTCAACGTCTTGACAAAGATCTGCATGC 327639 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| ||||||| | | ||||| || |||||||| || || || Sbjct 326638 TCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTA 326697 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||||||| | ||| ||||| | || || || | ||||| Sbjct 326698 TCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCGAGGGTGATC 326757 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || ||||| | || || || || |||||||||| Sbjct 326758 GTCTTACCAGTCAACGTCTTAACGAAAATCTGCATGC 326794 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| ||| ||||| | || || | | |||||||| || || ||||| || ||| Sbjct 327205 TCCTCCAACTGCTTTCCAGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTG 327264 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||| || | ||| ||||| | | ||||| || | |||||| Sbjct 327265 TCCTGAATCTTCGCCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATG 327324 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | || || |||||||||||||| Sbjct 327325 GTCTTCCCGGTCAACGTCTTGACAAAGATCTGCAT 327359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290488337720