Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12]
127 sequences; 39,289,314 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq27 104 4e-18
seq7 82.4 1e-11
>seq27
Length=764048
Score = 104 bits (114), Expect = 4e-18
Identities = 105/135 (78%), Gaps = 5/135 (4%)
Strand=Plus/Minus
Query 16455 TTCGAGAT-AACATCCA----AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCG 16509
|||||| | ||||| || ||| || |||||||| || || |||||||| ||||||||
Sbjct 87674 TTCGAGTTTAACATTCAGGACAGGCATTACCAAGCCTGCCATTCGTCGTCTTGCTCGTCG 87615
Query 16510 TGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGAT 16569
||| || || |||||| ||||||| | |||| || |||| |||| ||| ||||||||
Sbjct 87614 TGGCGGTGTGAAGCGTATCTCTGGTCTCATCTACGAGGAGACCCGTGGTGTATTGAAGAT 87555
Query 16570 CTTCCTCAAGACCGT 16584
||||||| | | |||
Sbjct 87554 CTTCCTCGAAAACGT 87540
Score = 100 bits (110), Expect = 4e-17
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||| ||||| ||||| |||||||||||||| || ||||| ||||| ||||||||| | ||
Sbjct 184533 AGGCATCACTAAGCCTGCTATCCGTCGTCTCGCGCGTCGAGGTGGTGTCAAGCGTATTTC 184474
Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575
|||||| | ||||| |||| || | || |||||||| |||||
Sbjct 184473 CGGATTGATTTATGAGGAGACACGCGGCGTATTGAAGATTTTCCT 184429
>seq7
Length=1982350
Score = 82.4 bits (90), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546
|| ||||| ||||| || ||||||||||| ||||||||| |||| || || |||||||
Sbjct 1227232 GCCATCCGCCGTCTTGCACGTCGTGGTGGTGTCAAGCGTATCTCGGGCCTGATCTATGAG 1227173
Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584
|||| |||| ||| | ||||||||| | ||| |||
Sbjct 1227172 GAGACCCGTGGTGTCCTCAAGATCTTCTTGGAGAACGT 1227135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075083883011
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |