Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq27 104 4e-18 seq7 82.4 1e-11 >seq27 Length=764048 Score = 104 bits (114), Expect = 4e-18 Identities = 105/135 (78%), Gaps = 5/135 (4%) Strand=Plus/Minus Query 16455 TTCGAGAT-AACATCCA----AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCG 16509 |||||| | ||||| || ||| || |||||||| || || |||||||| |||||||| Sbjct 87674 TTCGAGTTTAACATTCAGGACAGGCATTACCAAGCCTGCCATTCGTCGTCTTGCTCGTCG 87615 Query 16510 TGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGAT 16569 ||| || || |||||| ||||||| | |||| || |||| |||| ||| |||||||| Sbjct 87614 TGGCGGTGTGAAGCGTATCTCTGGTCTCATCTACGAGGAGACCCGTGGTGTATTGAAGAT 87555 Query 16570 CTTCCTCAAGACCGT 16584 ||||||| | | ||| Sbjct 87554 CTTCCTCGAAAACGT 87540 Score = 100 bits (110), Expect = 4e-17 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| |||||||||||||| || ||||| ||||| ||||||||| | || Sbjct 184533 AGGCATCACTAAGCCTGCTATCCGTCGTCTCGCGCGTCGAGGTGGTGTCAAGCGTATTTC 184474 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 |||||| | ||||| |||| || | || |||||||| ||||| Sbjct 184473 CGGATTGATTTATGAGGAGACACGCGGCGTATTGAAGATTTTCCT 184429 >seq7 Length=1982350 Score = 82.4 bits (90), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 || ||||| ||||| || ||||||||||| ||||||||| |||| || || ||||||| Sbjct 1227232 GCCATCCGCCGTCTTGCACGTCGTGGTGGTGTCAAGCGTATCTCGGGCCTGATCTATGAG 1227173 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 |||| |||| ||| | ||||||||| | ||| ||| Sbjct 1227172 GAGACCCGTGGTGTCCTCAAGATCTTCTTGGAGAACGT 1227135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075083883011