Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq11 134 4e-26 >seq11 Length=1765784 Score = 134 bits (148), Expect = 4e-26 Identities = 403/621 (65%), Gaps = 12/621 (2%) Strand=Plus/Plus Query 364194 CAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 |||||||||||||||| | || || || || || ||| || || || ||||| || Sbjct 1057212 CAAGTCCAACCAGCAGAATCTCGGCACTATCAAGTCCTCCAATCTTTGCACAGAGATCAT 1057271 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 || ||| || | || || |||||||| || || ||||| || || ||||| || || | Sbjct 1057272 CGAGTACTCCTCACCAGATGAGACTGCTGTCTGCAACCTCGCCTCCATCGCTCTCCCCTC 1057331 Query 364314 GTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 || ||| | || || | | | | ||| | | | ||||| | | || | | Sbjct 1057332 CTTCGTAGAGGAGGGCAGATATAATTTCCAAAAGTTGCACGACGTTGCAAAGGTTGTTGC 1057391 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 | ||| || || | | ||||| || || || |||||||||||||||||||| || Sbjct 1057392 GTTCAACCTTAACCGGATCATCGATGCCAACTACTACCCAATTCCTGAAGCCGAGCGGTC 1057451 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 || | |||||| |||||||||||| |||| || ||||| ||||||||| || ||| Sbjct 1057452 CAACAAGCGTCACCGCCCGATTGGTGTTGGCGTGCAGGGTCTCGCTGACACGTTCATGGC 1057511 Query 364494 GCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAAC 364553 |||| ||| | || || ||||| || || || || || | ||||||| || || Sbjct 1057512 GCTCCGTATGCCTTTCGACTCGCCCGAGGCGCGCCGGCTCAACCAACAGATCTTCGAGAC 1057571 Query 364554 AATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTC 364613 || || ||||| | || ||||| |||| |||| | || |||| Sbjct 1057572 CATCTACCACGCCGCGGTTGAGGCGAGTAGTGATATGGCTGAAACAGACGGGCCGTACGA 1057631 Query 364614 TACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCAC 364673 || || ||||| ||| || | ||| || | |||| ||||| ||| |||||| Sbjct 1057632 GACGTACGAGGGTAGTCCTGCGTCAAAAGGACAACTACAGTACGATCTGTGGGGTGTCAC 1057691 Query 364674 GCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAG-----AAGCATGGT 364728 || | | || ||| | ||||| || || ||| | |||| | ||| || Sbjct 1057692 TCCCACCGACCTGTGGGATTGGGAGACTCT------CAAGGCTAAGGTGGCACGCACGGG 1057745 Query 364729 ACT-CGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGG 364787 | | | || || || | ||| ||||||||||| ||||| || ||||| | || Sbjct 1057746 ATTGAGGAATTCACTGCTCTTAGCCCCCATGCCCACCGCTTCAACGAGTCAGATTTTGGG 1057805 Query 364788 AAACAACGAGTGCTTCGAACC 364808 || ||||||||||| || Sbjct 1057806 CTTTAATGAGTGCTTCGAGCC 1057826 Score = 113 bits (124), Expect = 1e-19 Identities = 190/273 (70%), Gaps = 3/273 (1%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||||||| || | |||||||| ||||||||||| |||||||| || | ||||| Sbjct 1056289 ATCAATGGTCGTACAGCCGAACGCCCTCAGCATATGTTGATGCGTGTGGCAGTGGGTATT 1056348 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTC-GTGTATT 363548 || || | ||| |||| ||| || || || ||||| ||| | || | | | || Sbjct 1056349 CACGGCTCTGATATTGAGCGCGCCATCGAGACCTATAACCTTAT--GTCCGAAGCTTCTT 1056406 Query 363549 CACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTG 363608 ||| || || |||| || | | |||||| || || | || || || ||| || || Sbjct 1056407 CACTCATGCATCGCCGACTCTCTTCAATGCGGGTACCCCCAACCCTCAAATGAGCTCCTG 1056466 Query 363609 CTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTG 363668 ||| | | ||||||||||| ||||| || || |||| |||||| | ||||| || Sbjct 1056467 CTTCTTGGTTTGCATGAAGGACGACTCCATAGAAGGCATCTATGACACCTTGAAGAACTG 1056526 Query 363669 TGCTCTTATTTCCAAGAATGCAGGCGGAATTGG 363701 |||| | || ||||| || ||||| ||||| Sbjct 1056527 TGCTATGATCAGCAAGACAGCGGGCGGTATTGG 1056559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351479199314