Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq25 89.7 4e-13 seq1 84.2 2e-11 >seq25 Length=839721 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 16707 ACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGG 16766 |||| || || || | || |||| || |||||| |||||| || || |||||||||| Sbjct 326564 ACCCACCGCGGAGACGCAAGACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGG 326623 Query 16767 CCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAG 16826 | || ||||||||| || ||||| ||| | || || ||||| |||||| || Sbjct 326624 AAAGCGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAG 326683 Query 16827 GCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | | |||||| || || ||| | | ||| || | | | | ||||| | ||| Sbjct 326684 GAATGCCCTCCTTATCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAA 326743 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || || |||| ||| || || ||||||||||| Sbjct 326744 CCTCGAGGGTGATCGTCTTACCAGTCAACGTCTTAACGAAAATCTGCAT 326792 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 16744 CTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATA 16803 |||||| || ||||||||||| | | || |||||||||| || || || || | Sbjct 327168 CTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAACTGCTTTCCAGCGAA 327227 Query 16804 AATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTG 16863 ||| || ||||| || || || | ||||| ||||| ||| | | |||||| | Sbjct 327228 AATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTCACATT 327287 Query 16864 GCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGAC 16923 | | | |||||| || ||| || | |||||||| || ||||||| ||| ||||| Sbjct 327288 GTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCGGTCAACGTCTTGAC 327347 Query 16924 AAAAATCTGCAT 16935 ||| |||||||| Sbjct 327348 AAAGATCTGCAT 327359 >seq1 Length=3640883 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || || |||||||| || ||||||||||||| | ||| | ||||| Sbjct 1684296 AGAACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1684237 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || ||| | || || ||||| ||||| ||| | ||||| || || Sbjct 1684236 TCGAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTATCC 1684177 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || ||||| |||||| | | | | |||||| | ||| ||| | || || | Sbjct 1684176 TGAATCTTTGC--CTTCACGTTGTCGATTGTGTCGGATGACTCGACTTCAAGCGTAATCG 1684119 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || || |||||||| |||||||| Sbjct 1684118 TCTTCCCCGTAAGGGTCTTGACAAAGATCTGCAT 1684085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087372999730