Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3 168 8e-37 >seq3 Length=2745113 Score = 168 bits (186), Expect = 8e-37 Identities = 375/559 (67%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| ||||| ||| || | |||||||| | || || | ||||| || ||||| || Sbjct 2540506 ACACGCGAAGTCGGTATGCATGCCCTCGTCGCGGCTGATGAGCTCGTTAGAGAACGTCAG 2540565 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 |||||||| || || ||||| || ||||| ||||| ||||| || ||||| || ||||| Sbjct 2540566 CCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAATATTGACGCGAAGGATCCGGAGAAGAA 2540625 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGC--TGTCATG 32836 || ||||| || || || || |||| || | ||| ||| | |||| || |||| Sbjct 2540626 GATGCCTTCCACAGCGGCGAAAGCAACGAGCCGCTCCCCAAATACCGACGTCTTGTCGGA 2540685 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 |||||| | ||||| ||||| ||||| || | ||||| || | ||| ||||| Sbjct 2540686 TATCCAGCGCAGCGCCCAGTCGGCTTTCTTCTTGATGCAAGGAATGGAGGTTATGGCATT 2540745 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 | ||| | | || | | ||||| | ||||| || || | || || | Sbjct 2540746 GAGGAGGTGATCACGCTCGTCAGGGTCTTTGATGTATGTGTCGATGAGTAGCGAGTAGGT 2540805 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 || || || ||||| || || || || || |||||||||||||| ||||| | | Sbjct 2540806 CTCGGAGTGGATGTTCTCTATCATTATCTGGAAGCCGTAGAAGCATCTTGCCTCAGCAGC 2540865 Query 33017 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 33076 || || || || | || || || | | |||||| |||||||| ||||| ||| || Sbjct 2540866 TTGAACCTCGTTAGAGAAGCGCTCGACGAGATTTTCGTTCACTATGCCGTCGGAGGCGGC 2540925 Query 33077 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCC 33132 || || || || |||| || || || |||| ||| || | | |||| Sbjct 2540926 GAAGAAAGCTAAGACATTCGAGATGAAGTACCGCTCGT-TGGCATTGAGACGGTCGTTCC 2540984 Query 33133 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 | || ||| ||| | |||| || | ||||| |||||||| || ||||| ||||| | Sbjct 2540985 AGTCTGTGAGATCATGGGATAGGTCGATCTCTTCTACTGTCCAGAAAGATGCTTCTGCTT 2541044 Query 33193 TTTTATACATATTCCAGAT 33211 |||| ||||| |||||| Sbjct 2541045 TTTTGTACATTCGCCAGAT 2541063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630994109200